Pairwise Alignments

Query, 627 a.a., ATP-dependent RNA helicase NGO0650 from Variovorax sp. SCN45

Subject, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (650), Expect = 4e-72
 Identities = 155/433 (35%), Positives = 238/433 (54%), Gaps = 51/433 (11%)

Query: 56  GFIKLGLAPELIAAVADMGFTQPTTVQEKVIPIAMGEQAGGAQSARFVDLMVSSQTGSGK 115
           GF  LGL+  ++ A+ + G+  P+ +Q + IP  +  +          D+M ++QTG+GK
Sbjct: 2   GFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGK----------DVMAAAQTGTGK 51

Query: 116 TAAFLLPVLHTLIKRQAEAEAEAKAEFQRLAAEAAARGEAVPKKPKRKDPTNARHFKAAT 175
           TA F LP+L                             E + K PK          +A  
Sbjct: 52  TAGFTLPIL-----------------------------ELLAKGPK---------VRANQ 73

Query: 176 PGALILCPTRELAQQVAHDAIELVRHCRGLRIANVVGGMPYQLQIARL-QNADLVVATPG 234
             ALIL PTRELA Q+  + +   RH   L+ A V GG+    Q+ R+ + AD++VATPG
Sbjct: 74  VRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCKGADILVATPG 132

Query: 235 RLLDLQRSMQIKLDQVKFLVVDEADRMLDLGFADDLAEVNQLTIERQQTMMFSATFAPRI 294
           RL+DL     +K DQ++ LV+DEADRMLD+GF  D+ ++ +L  E++Q ++FSATF+  I
Sbjct: 133 RLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEI 192

Query: 295 QQLATRVMREPQRVTIDSPQEKHANIKQVLFWADNAQHKRKLLDHWLRDTSINQAIVFAS 354
           ++LA  ++  P  +++         ++Q ++ AD  + K  +L   +++ +  Q +VF  
Sbjct: 193 RELAKGLVNNPVEISVSPANSTARTVEQCIYPAD-VKKKPDMLVKLVKEGNWQQVLVFMR 251

Query: 355 TQVECDGLANDLQQDGFSAVALHGALSQGLRNRRLMALRQGQVQILVATDVAARGIDVPT 414
           T+   + LA  L + G +A A+HG  SQG R R L   + G+V+ILVATD+AARGID+P 
Sbjct: 252 TKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQ 311

Query: 415 ITHVFNFGLPMKAEDYTHRIGRTGRAGRDGLAITFAEFRDRRKIMDIEHYSRQQFKAEVV 474
           +  V NF LP  AEDY HRIGRTGRAG  G AI+     +  ++  IE  ++       +
Sbjct: 312 LPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERLTQALLPRVNL 371

Query: 475 PGMEPQQRMPQSR 487
            G EP  ++P+S+
Sbjct: 372 AGFEPTNQLPESK 384