Pairwise Alignments

Query, 184 a.a., 16S rRNA processing protein RimM from Variovorax sp. SCN45

Subject, 178 a.a., 16S rRNA processing protein RimM from Pseudomonas fluorescens FW300-N2E2

 Score = 87.0 bits (214), Expect = 2e-22
 Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 9/175 (5%)

Query: 13  DAIEVGRIADAWGIKGWFKVLPHSAQPEALFSSKRWFLQAPGASASTAFRLAIREAKEHS 72
           D I VG+I    G++G  KV   +   + L   K W L+  G+      ++ +   + + 
Sbjct: 10  DLIVVGKIYSVHGVRGEVKVYSFTDPIKNLLDYKTWTLKREGSVK----QVELVSGRGND 65

Query: 73  DCIVATSEDVPDRNAAEALRGARVFVPRSSFPTAGDDEYYWVDLIGLSVVNREGVVLGTV 132
             +VA  + + DR  A  L G  + VPR+ FP   D EYYW  L+GL V++  G +LG +
Sbjct: 66  KFLVAKLKGLDDREEARLLAGYEICVPRNLFPELTDGEYYWYQLVGLKVIDHLGQLLGKI 125

Query: 133 RELLATGPQTTLVL---AAEEDGKAVERMVPFVSVFVDKVDLPGRLITVDWQPDF 184
             LL TG    +V+       D +  ER++P+    V  VDL    + V+W  DF
Sbjct: 126 DHLLETGSNDVMVVKPCVGSLDDR--ERLLPYTEQCVLAVDLAAGEMKVEWDADF 178