Pairwise Alignments

Query, 184 a.a., 16S rRNA processing protein RimM from Variovorax sp. SCN45

Subject, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

 Score = 91.7 bits (226), Expect = 7e-24
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 7/175 (4%)

Query: 13  DAIEVGRIADAWGIKGWFKVLPHSAQPEALFSSKRWFLQAPGASASTAFRLAIREAKEHS 72
           + + VG++  ++GI+GW KV  ++  PE++F    W++   G          +   K H+
Sbjct: 14  EKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVE----YKVEGWKRHN 69

Query: 73  DCIVATSEDVPDRNAAEALRGARVFVPRSSFPTAGDDEYYWVDLIGLSVVNREGVVLGTV 132
              V   + +  R  A  L    + +  +S P   +DE+YW +L G+ VV   G  LG V
Sbjct: 70  KGWVVKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLGVV 129

Query: 133 RELLATGPQTTLVLAA--EEDGKAVERMVPFVSVFVDK-VDLPGRLITVDWQPDF 184
            +++ TG    LV+ A  ++     ER++PF+   V K VD   + I VDW P F
Sbjct: 130 TDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVDWDPAF 184