Pairwise Alignments

Query, 759 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

Subject, 814 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  539 bits (1388), Expect = e-157
 Identities = 295/613 (48%), Positives = 398/613 (64%), Gaps = 20/613 (3%)

Query: 5   TLIGRWAMKPFSKALPPLGDTERAALEAGTVGFEGRLFAGRPDFDVLAAMGPNQLTEREQ 64
           +LI   A+  F K LP +  TE+ ALEAGTV +E  LF G+PD+  L  +   +L+  EQ
Sbjct: 67  SLISGKALAVFKKVLPAMSQTEKEALEAGTVWWEAELFKGKPDWKKLHNIQAPKLSAEEQ 126

Query: 65  AFLDNEVRALCHMLDDHAID-QARDLPPEVWRFLREKRFFGMIIPEEFGGLGFSHFAHAT 123
           AFLD  V  +C M+ D+ +  +  DLPPEVW FL+EK+FF MII +++GGL FS +A + 
Sbjct: 127 AFLDGPVNEVCAMVSDYQVTHELADLPPEVWTFLKEKKFFAMIIKKQYGGLEFSAYAQSL 186

Query: 124 VVTRIATINTATAVTVMVPNSLGPAELLLRYGTDAQKDHYLPRLADGRELPCFGLTSPYA 183
           V+ ++  ++   + TV VPNSLGP ELL  YGT+ QK++YLPRLA+G+E+PCF LTSP A
Sbjct: 187 VLQKLTGVSGVLSSTVGVPNSLGPGELLQHYGTEEQKNYYLPRLAEGKEIPCFALTSPEA 246

Query: 184 GSDAASIPDRGVVVEREFEGRMTRGFLVDFDKRYITLAPVATVVGLAFHAVDESRPEG-- 241
           GSDA SIPD GVV + ++EG+   G  + ++KRYITLAPVATV+GLAF   D   PEG  
Sbjct: 247 GSDAGSIPDFGVVCKGQWEGKEVLGMRLTWNKRYITLAPVATVLGLAFKLRD---PEGLL 303

Query: 242 --QRELGITCALIPVPHEGMEIGRRHRPMDSAFMNGPIHGRQVFVPMDWIIGGDKQVGQG 299
             + ELGITCALIP   +G+EIG RH P++  F NGP   + +FVP+D+IIGG K  GQG
Sbjct: 304 GDKEELGITCALIPTHLKGVEIGNRHFPLNVPFQNGPTRAKDLFVPLDFIIGGPKMAGQG 363

Query: 300 WRMLMECLAAGRAISLPALGSAMQQTALYVSNGYGQIREQFGMPVGKFHAVAGLVAQMSA 359
           WRML+ECL+ GR I+LP+  +   +TA   +  Y +IR QF  P+G+   +   +A+++ 
Sbjct: 364 WRMLVECLSVGRGITLPSNSTGGIKTAALATGAYARIRRQFKQPIGQMEGIEEPLARLAG 423

Query: 360 ELYATDAARRFTAAALDKGERPSVASAILKVQLTEAGRRAVNHGMDILGGKGIIYGPSNL 419
             Y  DAA   T A +D GE+PSV SAI+K   T  G+R++   MDI+GGKGI  GP+N 
Sbjct: 424 NAYVMDAASNLTVAGIDLGEKPSVISAIVKYHCTHRGQRSIIDAMDIVGGKGICLGPANF 483

Query: 420 LGVAYRQAPIAITVEGANILTRALIVFGQGAVRCHPHVLDEMAAVQAGDETALGK---AL 476
           L   Y+ APIA+TVEGANILTR++I+FGQGA+RCHP+VL EM A  + +  A+ K   AL
Sbjct: 484 LARGYQGAPIAVTVEGANILTRSMIIFGQGAIRCHPYVLREMEAAYSPNSDAVEKFDSAL 543

Query: 477 MAHGRHVATNLWHSLFGAPVLG----EPPEDLLPE-ARLVARMSAKYALTADLAMGMLGG 531
             H   V +NL  SL+     G     P  D      + + R SA  AL AD++M +LGG
Sbjct: 544 AGHVGFVLSNLVRSLWLGLTDGYGSQAPTRDATKRYYQQLNRYSANLALLADISMAVLGG 603

Query: 532 KLKRMELLSARLGDVLAHLYLASASIWRYRVDGAP-ELLPFAQAAIRLQLDEAGKILRDL 590
            LKR E LSARLGD+L+ LYL+SA++ R+  DG P E LP     ++  L +    + + 
Sbjct: 604 SLKRRERLSARLGDILSQLYLSSATLKRFENDGRPAEDLPLVHWGLQDSLRQTEIAIDEF 663

Query: 591 YANLPTAGRRVIG 603
            AN P    R+IG
Sbjct: 664 LANFP---NRIIG 673