Pairwise Alignments

Query, 602 a.a., Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) from Variovorax sp. SCN45

Subject, 539 a.a., fumarate reductase subunit A from Methanococcus maripaludis S2

 Score =  298 bits (764), Expect = 3e-85
 Identities = 192/553 (34%), Positives = 299/553 (54%), Gaps = 46/553 (8%)

Query: 14  DVVIVGAGGSGMRASLQLARAGLNVAVLSK-VFPTRSHTVAAQGGVGASLGNMSEDNWHY 72
           DV+I+G GG+  RA+++  +   NV + SK +F     TV A+GG  A L    +D++  
Sbjct: 4   DVLIIGGGGAAARAAIECGQK--NVVIASKGLFGKSGCTVMAEGGYNAVLNE--KDSFEK 59

Query: 73  HFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQRPFGGHTANYG 132
           H+ DT+KG  ++ D+  ++ + + AP     LE FG  FDR+      QRPFGG + N  
Sbjct: 60  HYSDTMKGGGYINDKKLVDVLVKNAPNEFKNLEKFGCIFDRSESAEFAQRPFGGQSFN-- 117

Query: 133 EKPVQRACAAADRTGHAMLHTLYQK-NVEARTQFFVEWMALDLIRDEEGD-------VVG 184
                R C + DRTGH M+  L +  N   R +   + MA+ LI DE  +         G
Sbjct: 118 -----RTCYSGDRTGHEMIAGLMEYLNKFERIKILEDTMAIKLIVDEVEENGKKLKKCFG 172

Query: 185 VTALEMETGDLHILQAKTVLLATGGAGRIFQASTNAFINTGDGLGMAARSGIPLQDMEFW 244
              L++  GD++ + AK+ +LATGGAG+I+  ++N     GDG  +A R G+ L DME  
Sbjct: 173 AVFLDLLNGDIYPVYAKSTILATGGAGQIYPITSNPKQKVGDGFAIAYREGVELVDMEMV 232

Query: 245 QFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQEIKE 304
           QFHPTG+ G G+L+TE  RGEG IL N N ERFM+ Y     +L+ RD V++++  EI+E
Sbjct: 233 QFHPTGMLGTGILVTEAVRGEGGILYNKNKERFMKNYDSKRMELSTRDVVAKAIYNEIQE 292

Query: 305 GRGCGPNKDYVLLKLDHLGADTIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQMGGI 364
           GRG       V L + HL  + I ++L +++        VDI KEP+ V PT H+ MGGI
Sbjct: 293 GRGIDGG---VYLDVTHLEPEVIKEKLETMFS-QFKLVGVDIRKEPMKVAPTAHHFMGGI 348

Query: 365 PTNIHGQVVVQKGEDNSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGNHIV 424
             N          ED    ++GL+A GE +   +HGANRLG N+L +  VFG  AG + +
Sbjct: 349 KIN----------EDCETNISGLFACGEVA-GGLHGANRLGGNALAETQVFGSIAGRNAL 397

Query: 425 EFADKLKEHKPLPNDAADRTLERL-NRLEATTGGEYAQDVAGEIRAVMQQHAAVFRKQAS 483
            +A++  +   +  D+ ++ +E+L N  + +  G     +  E++  M    ++ R +  
Sbjct: 398 NYAEEKIDISKV-YDSVEKYIEKLKNTFKGSNSGNNVYSLIDELKNTMWDFVSISRDENG 456

Query: 484 MDEGVVKIAAVR-ERVKAIGLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARKECRG 542
           +   + KI  +  ++V   G+ D SK         LE++N++ V++  + SA  RKE RG
Sbjct: 457 LKTALEKINEIAGKKVLINGVVDFSK--------KLELENMVLVSKIVINSALLRKESRG 508

Query: 543 AHTVEDYERPADD 555
           AH   DY +  ++
Sbjct: 509 AHFRNDYPKTNEE 521