Pairwise Alignments

Query, 1679 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 709 a.a., Outer membrane autotransporter barrel from Pseudomonas syringae pv. syringae B728a

 Score =  105 bits (261), Expect = 2e-26
 Identities = 187/792 (23%), Positives = 301/792 (38%), Gaps = 145/792 (18%)

Query: 893  DIVNDATVVFEQTKAGGGGTYAGTMSGTGSLRKIGDGELVLASVNSYSGGTSVEAGTLNA 952
            +IV+D T   +   A     +  ++ GTG L   G     +  ++SY G T +   TL  
Sbjct: 8    EIVSDRTEYVDAASA----FHNYSVYGTGYLHSDG---AAIKRISSYGGRTELTGNTLVK 60

Query: 953  SVTGALGSGPVSVANGAAVLFSGKADMGAVTLSNGPDGLINFVGSVTAGQAAIVNGKGGT 1012
                + G   VSV +             +  LS+    L+    S    + ++V GKGG 
Sbjct: 61   DGMLSDGDARVSVKD-------------STILSDSTIALVVQGNSNMTLEHSVVEGKGGG 107

Query: 1013 VRISE---LTANGTSIGSLGGAGQVVLGAKTLTTGGLNADTEISGVVSGTGGSLVKVGTG 1069
            + ++E      + T +GSL G                       G  +G G  +      
Sbjct: 108  ITVAEDAFALISNTQVGSLQGE---------------------VGRHTGWGVGIFGARAD 146

Query: 1070 ALTLSGANTYTGGTTLRQGRLNVGHSQALGGGTLSMDDDTTLGFSADGLTIANTIHLTGQ 1129
              + S     + G      RL VG       G LS+D+ T      +GLT A  I + G+
Sbjct: 147  ITSRSYIKGLSHGVWFTHPRLTVGDGTQFNYGQLSIDNSTV-----EGLTGA-AIRVEGR 200

Query: 1130 --LDPIIDTGAFSGTLSGAISGGGFITK---EGTGTL-----TLSGANTYTGATNVAQGT 1179
              +  + D    + TL   +SG G + +   + T        TL+G N     T+    T
Sbjct: 201  EGISHLADIEIKNNTL--LLSGNGMLLEVLNQSTANFNVDNSTLNG-NLVADDTSTLNIT 257

Query: 1180 LKAGAANTFSAASAHSVA--AGATLDLAGFNQTLASLANSGTVSLAGAAAGTTLTVNGNY 1237
            L+ GA       + + +A  +G+   + G N   +     G VS AG    T   ++ N 
Sbjct: 258  LQNGAQLNGDIVNGNRLAITSGSHWQMQGDNAVRSLSLQGGRVSFAGEGFHT---LSLNE 314

Query: 1238 VGNNGVLKLGTALNGTGPSDRLVINGGTASGKTSVQIANLGGLGALTTGNGIEVVTAQNG 1297
            +   G   L   L+  G  D + +NG  ASG+  +++ N           G+EVV+A   
Sbjct: 315  LSGAGTFGLRVDLDN-GVGDLIDVNG-QASGQFGLRVRN----------TGVEVVSADMA 362

Query: 1298 AKTTAQTTR-DA-FSLAGGHVDAGAYEYRLYAADASGAGESWYLRSSINAVTPTNPAGVP 1355
                  T   DA FSL GG VD GAY Y L        G  W++      ++P+  + + 
Sbjct: 363  PLKVVHTEGGDAQFSLLGGRVDLGAYSYLL-----EQQGNDWFIVGKDKVISPSTQSAL- 416

Query: 1356 VVTYRAEASLYAALPGQLRQGNLAMLGDLRKRVGDDDVKGTAPSATGAERRAWARVLSTD 1415
                    +LY+A P       ++ L  LR R+G+    G A     A         S  
Sbjct: 417  --------ALYSAAPAIW----MSELSTLRSRMGEVRASGRAGGWMRAYGNRLNATTSDG 464

Query: 1416 IDIQQGGAVSPTSKGRLTGFQAGTDLLATPNWRAGIYVGQLDGDARVNGFASGIQNLGVG 1475
            +D +Q          + +G   G D     +    + VG L G +      SGI      
Sbjct: 465  VDYRQ----------KQSGLSLGADAPVEVS-NGQLVVGVLGGYS-----TSGIDLSRGT 508

Query: 1476 RNDLRSQYVGVYGTYTSDSGFYADAVVQSGRHRYTVEPLMGLGAAGKG----NSLLGSIE 1531
               + S Y G Y T+ SD G+Y D V++  R R   +  M   +  KG    N + G +E
Sbjct: 509  TGKVDSYYAGAYATWLSDDGYYVDGVLKLNRFRNKADVAMSDASKAKGDYTNNGIGGWVE 568

Query: 1532 VGQAFPIGSSGWTVEPQLQLIHQHMDLSNSAIVGAIAQPQADSGWVAR--AGVRVKGQID 1589
             G+   + +  + +EP  QL         S++V    + + D+G  A+      V G++ 
Sbjct: 569  FGRHIKL-ADDYFLEPFAQL---------SSVVVQGQELRLDNGMKAKNDQTQSVLGKVG 618

Query: 1590 TGM---------GALQPYGRFNVYKTSSGADIARFVNGATTTDIAAPTGGTNTELAGGFT 1640
            T +         G LQPY R  + +  S  +  +    A          G+  EL  G +
Sbjct: 619  TSLGRSVALKDGGVLQPYVRVAIAQEFSRRNEVK----ANDVKFDNSLFGSRGELGAGVS 674

Query: 1641 LGLNASTSLYGE 1652
            + L+    L+ +
Sbjct: 675  VSLSERLKLHAD 686



 Score = 33.1 bits (74), Expect = 1e-04
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 24/146 (16%)

Query: 692 LSGGNISITGRKGVTLQADVSTK-GTLTLASDGSVMQTAGVVTA------GTLTGSA--- 741
           L+G  I + GR+G++  AD+  K  TL L+ +G +++     TA       TL G+    
Sbjct: 190 LTGAAIRVEGREGISHLADIEIKNNTLLLSGNGMLLEVLNQSTANFNVDNSTLNGNLVAD 249

Query: 742 GSVSMNQANQIGAL--GDFTAVGAFSLRNAQALQVTGNVAASSVALDVAQGVVVTGSISA 799
            + ++N   Q GA   GD       ++ +    Q+ G+ A  S++L   QG    G +S 
Sbjct: 250 DTSTLNITLQNGAQLNGDIVNGNRLAITSGSHWQMQGDNAVRSLSL---QG----GRVSF 302

Query: 800 TGNKGEVISVASDTRLQVGNGGTTGV 825
            G     +S+      ++   GT G+
Sbjct: 303 AGEGFHTLSLN-----ELSGAGTFGL 323