Pairwise Alignments

Query, 242 a.a., Undecaprenyl diphosphate synthase (EC 2.5.1.31) from Variovorax sp. SCN45

Subject, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

 Score =  132 bits (333), Expect = 5e-36
 Identities = 82/232 (35%), Positives = 117/232 (50%), Gaps = 11/232 (4%)

Query: 9   PHHVAIVMDGNGRWATRRFLPRVAGHKQGVESLRRCVKACADRGVGVLTVFAFSSENWNR 68
           P HV I+MDGN R A +       GH  G   +   +  C    +  +T++AFS EN+NR
Sbjct: 33  PKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNR 92

Query: 69  PVEEVSGLMELMVGALAR--EVPRLSSDGVRLYFVGERGGLSPKMVKGLVDAEAATAHNE 126
           P +EV  LM+L         + P +  D +R+  +G R  L   + K +  AE  T    
Sbjct: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYS 152

Query: 127 RMVLNVCFNYGGRWDVAQAA---AKLVARGEAVTE------ASLDRAMSLAHVPDPDLFI 177
              +N    YGG+ ++  +    AK V  GE   E       S +   S    P+PDL I
Sbjct: 153 DYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLII 212

Query: 178 RTGGEQRLSNFLLWQSAYAELFFSDKLWPEFDEAALDEAIAAFQGRERRFGQ 229
           RT GE+R+SNFL WQS Y+EL+F +  WP F +  L  +I  +Q RERR+G+
Sbjct: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYGK 264