Pairwise Alignments

Query, 242 a.a., Undecaprenyl diphosphate synthase (EC 2.5.1.31) from Variovorax sp. SCN45

Subject, 275 a.a., undecaprenyl diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  230 bits (587), Expect = 2e-65
 Identities = 118/234 (50%), Positives = 153/234 (65%), Gaps = 7/234 (2%)

Query: 8   VPHHVAIVMDGNGRWATRRFLPRVAGHKQGVESLRRCVKACADRGVGVLTVFAFSSENWN 67
           +P HVAI+MDGNGRWA  +  PRV GHK GV+++RR V A +  G+  LT+FAFSSENW 
Sbjct: 36  LPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSSENWR 95

Query: 68  RPVEEVSGLMELMVGALAREVPRLSSDGVRLYFVGERGGLSPKMVKGLVDAEAATAHNER 127
           RP +EVS LMEL    L RE+  L  + V+L  +G+    S ++ K +  AE  TA N  
Sbjct: 96  RPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTAGNSG 155

Query: 128 MVLNVCFNYGGRWDVAQAAAKLVARGEA-------VTEASLDRAMSLAHVPDPDLFIRTG 180
           ++LNV  NYGGRWD+ QAA KL  + E         TE +L   + + +  + DL IRTG
Sbjct: 156 LILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSEVDLIIRTG 215

Query: 181 GEQRLSNFLLWQSAYAELFFSDKLWPEFDEAALDEAIAAFQGRERRFGQTSAQV 234
           G+ R+SNF+LWQ+AYAEL F D LWP+FDE A  EAIA F  R+RRFG T +Q+
Sbjct: 216 GDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFGLTGSQI 269