Pairwise Alignments

Query, 270 a.a., tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) from Variovorax sp. SCN45

Subject, 286 a.a., pseudouridylate synthase I from Pseudomonas stutzeri RCH2

 Score =  227 bits (579), Expect = 2e-64
 Identities = 121/255 (47%), Positives = 158/255 (61%), Gaps = 6/255 (2%)

Query: 2   RLALGIRYNGQAYEGWQSQRSG-RTVQDKLEAALSKFAA-QPIGTLCAGRTDAGVHALMQ 59
           R+ALG+ Y G  Y G+Q QR+G  ++Q+ LE ALSK A  QP+   CAGRTDA VHA  Q
Sbjct: 19  RIALGVEYKGSRYRGFQRQRAGVPSIQESLETALSKVAGGQPVTLSCAGRTDALVHASGQ 78

Query: 60  VVHFDTTVEREPFSWMRGPNRFLPDDIAVQWAQPVPDEFHCRASALARRYLYVLSQSPVR 119
           VVHFDTTV R   +W+ G N  LP DI+V WA+ +P  F  R SA+ARRY YV+    +R
Sbjct: 79  VVHFDTTVARSMHAWIMGANMNLPPDISVTWAKEMPQRFDARFSAMARRYRYVIYNDQIR 138

Query: 120 PSLDTGRVGWSMHALDGDAMRAAAALLVGRHDFSSFRASACQARSPVKDLRRIEITRVGE 179
           P+     V W+   LD + MRAAAA  VG HDFS+FRA  CQA+SP+K +  +E+   G 
Sbjct: 139 PAHMAEEVTWNHRPLDIERMRAAAAAFVGTHDFSAFRARQCQAKSPIKTIHHLELLEHGR 198

Query: 180 GERCRWHFEFEADAFLHHMIRNLMGCLVRIGRGDEPVEWISQVLEARSRKVAAPTFSADG 239
                   +  A+AFLHHM+RN  G L+ IG G+ PVEW  +VL++R R+    T    G
Sbjct: 199 ----LIVIDVRANAFLHHMVRNFAGVLMTIGAGERPVEWAGEVLQSRIRRTGGVTAHPYG 254

Query: 240 LYFLGPLYDAKWGLP 254
           LY +   Y  ++ LP
Sbjct: 255 LYLVEVDYPEEFELP 269