Pairwise Alignments

Query, 281 a.a., Tryptophan synthase alpha chain (EC 4.2.1.20) from Variovorax sp. SCN45

Subject, 268 a.a., tryptophan synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (393), Expect = 7e-43
 Identities = 92/246 (37%), Positives = 135/246 (54%), Gaps = 5/246 (2%)

Query: 1   MSRIAATFDALKKDGRRALVPYVTAGFPFADITPELMHGMVEAGADVIELGVPFSDPMAD 60
           M+R  A F  L    + A VP+VT G P  + +  +M  +++AGAD +ELG+PFSDP+AD
Sbjct: 1   MNRYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLAD 60

Query: 61  GPVIQKAGEAALALGIGMKQVLAIVAAFRQKNATTPVVLMGYANPVERYDLVHGKQAFIR 120
           GP IQ A   ALA          ++A  R +N  TP+ L+ YAN V       G   F +
Sbjct: 61  GPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLV----YARGIDDFYQ 116

Query: 121 DAAAAGVDGLLVVDYPPEECEAFAADLKAAGIDLIFLLAPTSTDERMAQVARIASGYVYY 180
               AGVD +L+ D P  E + F A  +  GI  IF+  PT++DE +  VA++  GY Y 
Sbjct: 117 RCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYL 176

Query: 181 VSLKGVTGAGHLDAEAVGQMIPRIRQHVGIPVGVGFGIRD-ARTAQAVGSAADAVIIGTK 239
           +S  GVTGA       V  ++ R++Q    P  +GFGI + A+  QA+ + A   I G+ 
Sbjct: 177 LSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSA 236

Query: 240 IIQLIE 245
           ++++IE
Sbjct: 237 VVKIIE 242