Pairwise Alignments

Query, 281 a.a., Tryptophan synthase alpha chain (EC 4.2.1.20) from Variovorax sp. SCN45

Subject, 267 a.a., tryptophan synthase subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score =  155 bits (391), Expect = 1e-42
 Identities = 98/268 (36%), Positives = 142/268 (52%), Gaps = 7/268 (2%)

Query: 2   SRIAATFDALKKDGRRALVPYVTAGFPFADITPELMHGMVEAGADVIELGVPFSDPMADG 61
           +R  A F AL   GR A VP+VT G P  +++ +++  +VE GAD +ELG PFSDP+ADG
Sbjct: 3   NRYQAAFAALNASGRGAFVPFVTIGDPNRELSLKIIETLVENGADALELGFPFSDPLADG 62

Query: 62  PVIQKAGEAALALGIGMKQVLAIVAAFRQKNATTPVVLMGYANPVERYDLVHGKQAFIRD 121
           PVIQ A   ALA G        I+ A R K    P+ L+ YAN V      +G +AF   
Sbjct: 63  PVIQGANLRALAAGTTPGGCFEIITAVRAKYPELPIGLLLYANLV----YANGVEAFYAK 118

Query: 122 AAAAGVDGLLVVDYPPEECEAFAADLKAAGIDLIFLLAPTSTDERMAQVARIASGYVYYV 181
           A AAGVD +L+ D P EE   F A  KA  +  IF+  P    E + QVA    GY Y +
Sbjct: 119 AKAAGVDSVLIADVPVEEAAPFIAAAKAHEVAPIFIAPPNGDAETLRQVAEQGQGYTYLL 178

Query: 182 SLKGVTGAGHLDAEAVGQMIPRIRQHVGIPVGVGFGIRDA-RTAQAVGSAADAVIIGTKI 240
           S  GVTG        +  ++ +++     P  +GFGI +  +   A+ S A   I G+ +
Sbjct: 179 SRAGVTGTESKAGMPLDDILAQLKAFDAPPPLLGFGIAEPDQVKAAIDSGAAGAISGSAV 238

Query: 241 IQLIEDQPRDK--VVPAVREFLAGIREA 266
           +++IE    D+  ++ A+ +F   ++ A
Sbjct: 239 VKIIETHQDDEQALLSALGQFTREMKAA 266