Pairwise Alignments

Query, 515 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Variovorax sp. SCN45

Subject, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 28/310 (9%)

Query: 74  VSVAGRMMLKRVMGKASFATLQDATSRIQLYVTRD-----AVGEEAYAEFKRWDLGDIVG 128
           V + G +  +R +G   F  ++D    +Q+ V  D     AV  +  +EF     G++  
Sbjct: 18  VELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVANQLRSEFCIKLTGEVRA 77

Query: 129 AEGTLMKTK--TGELSIKVTQLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDESAR 186
              + +  +  TGE+ +    L ++ +S   LP  F+    +EQ+ + RY+DL   E + 
Sbjct: 78  RPESQVNKEMATGEVELLARSLEIINRS-DVLPLDFNQKNSEEQRLKYRYLDLRRPEMSD 136

Query: 187 VRFTARSKAVSALREFMVANDFLEVETPML-HPIPGGAN--AKPFKTHHNALDQEMFLRI 243
            R   R+KA S +R F+  + FL++ETP+L    P GA     P + H  +      L  
Sbjct: 137 -RIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSF---YALPQ 192

Query: 244 APELYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLI 303
           +P+L+ + L++ GF+R ++I + +R+E +     PEFT ++   ++     +   TE +I
Sbjct: 193 SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMI 252

Query: 304 RTIADKAVGTQ------------QLTYGGKPVDLTQPFERLTIREAILKYTDAEGVAQGV 351
           R +  + +                  +G    DL  P E + + + +LK  D +  +   
Sbjct: 253 REMWLELLNVDLGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVAD-LLKDVDFKVFSGPA 311

Query: 352 DDTAWLIAAL 361
           +D    +AAL
Sbjct: 312 NDPKGRVAAL 321



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 14/185 (7%)

Query: 334 IREAILKYTDAEG---VAQGVDDTAWLIAALRKIGLSEEKDK--LSQRSLASLQVM---Y 385
           I +AI++ T A+    +  G D    +  AL  + L   K+    ++ + A L V+    
Sbjct: 376 IIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKELGITNESAWAPLWVVDFPM 435

Query: 386 FEETVEEKLWQPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAED 445
           FE   E  +         P  +SP     +    ++  +++ + G E G G   +++AE 
Sbjct: 436 FESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRIHNAEM 495

Query: 446 QAARFNAQVAAKDGGDDEAMYYDHDFVR-ALEYGMPPTGGCGIGIDRLMMLLTDSPSIRD 504
           Q+A F+       G   E       F+  AL++G PP  G   G+DRL+MLL  + +IRD
Sbjct: 496 QSAVFDIL-----GITPEEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRD 550

Query: 505 VILFP 509
           VI FP
Sbjct: 551 VIAFP 555