Pairwise Alignments

Query, 515 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Variovorax sp. SCN45

Subject, 510 a.a., lysine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  493 bits (1268), Expect = e-144
 Identities = 260/501 (51%), Positives = 343/501 (68%), Gaps = 9/501 (1%)

Query: 13  AVDENQLIAERREKLKLLRTAQVEGKGVAFPNDFKPGHRAAALVEAHGATEAEALEAQAV 72
           A +EN+LIAERR KL  +R      K    PN F+    A  L +  G    E LEA   
Sbjct: 15  AQEENKLIAERRSKLDHIRK---NCKANGHPNSFRRDSLAGDLQKKFGEKSKEELEALNH 71

Query: 73  AVSVAGRMMLKRVMGKASFATLQDATSRIQLYVTRDAVGEEAYAEFKRWDLGDIVGAEGT 132
            VS+AGR+M KR      F  +Q+ + RIQ Y +++ V +E   +++  D+GDI+G +G 
Sbjct: 72  VVSIAGRVMAKR----GPFLVIQETSGRIQAYASKE-VQQELKDKYQGLDIGDIIGVQGA 126

Query: 133 LMKTKTGELSIKVTQLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDESARVRFTAR 192
           L K+  G+L + + Q +LLTK+LRPLP+KFHG+ DQE +YRQRYVDLI +E++R  F  R
Sbjct: 127 LHKSGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVR 186

Query: 193 SKAVSALREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRL 252
           SK +SA+R FM++  F+EVETPM+H IPGGA+A+PF THHNALD  M+LRIAPELYLKRL
Sbjct: 187 SKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRL 246

Query: 253 IVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVG 312
           +VGGF+RVFEINR++RNEG+S RHNPEFTMMEFY AY +Y+DLMD TE L+ ++A + +G
Sbjct: 247 VVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLG 306

Query: 313 TQQLTYGGKPVDLTQPFERLTIREAILKYTDAEGVAQGV-DDTAWLIAALRKIGLSEEKD 371
           +  + YG   V+    + R+++ +AI  Y       Q + ++       +  I  S   D
Sbjct: 307 STSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVD 366

Query: 372 KLSQRSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLARANDERPEVTERFELYITGR 431
                +   L    F ET E KL QPTFI  +P +ISPLAR +D+ P  T+RFE +I GR
Sbjct: 367 VEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGR 426

Query: 432 EFGNGFSELNDAEDQAARFNAQVAAKDGGDDEAMYYDHDFVRALEYGMPPTGGCGIGIDR 491
           E  NGFSELNDAEDQ ARF AQV AK+ GDDEAM+YD D++ ALE+G+PPT G GIGIDR
Sbjct: 427 EVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDR 486

Query: 492 LMMLLTDSPSIRDVILFPALR 512
           L+MLLT++ +IRDVILFPA+R
Sbjct: 487 LVMLLTNTHTIRDVILFPAMR 507