Pairwise Alignments

Query, 515 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Variovorax sp. SCN45

Subject, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis S2

 Score =  111 bits (278), Expect = 5e-29
 Identities = 114/456 (25%), Positives = 201/456 (44%), Gaps = 50/456 (10%)

Query: 68  EAQAVAVSVAGRMMLKRVMGKASFATLQDATSRIQLYVTRDAVGEEAYAEFKRWDLGDIV 127
           E     V++ G +   R +GK +F  L+D    IQ  V +  V EE +   K+    DIV
Sbjct: 19  EMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEIAKKLGKEDIV 78

Query: 128 GAEGTLMKTKTGELSIKVT--QLRLLTKSLRPLP--DKFHGMADQEQKYRQRYVDLITDE 183
             +G ++  +      +V   ++R+L K+  PLP        A+ + +  +R++D+   +
Sbjct: 79  AIKGKVVANEKAPKGFEVIPIEIRVLNKADAPLPLDPSEKVSAEIDTRLDKRFLDIRRPK 138

Query: 184 SARVRFTARSKAVSALREFMVANDFLEVETPML--HPIPGGANAKPFKTHHNALDQEMFL 241
              + F  RS+ + ++R+      F+EV TP L      GG    P     +  ++E FL
Sbjct: 139 IQAI-FKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTELFPI----SYFEKEAFL 193

Query: 242 RIAPELYLKRLIVGGFERVFEINRSYRNEGISV-RHNPEFTMMEFYAAYWNYRDLMDFTE 300
             +P+LY + ++ GGF++VFEI + +R E  +  RH  E   ++   ++ N +D M   E
Sbjct: 194 GQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSEMSFVNEKDAMAMLE 253

Query: 301 TLIRTIADKAVGTQQLTYGGKPVDLTQPFERLTIREAILKYTDAEGVAQGVDDTAWLIAA 360
            ++                   ++  +P E   I    L +   E     V  T  +  A
Sbjct: 254 KVVYNCY-------------SDIEYNRPNE---IELLELNWEIPEKTFDKVTYTEAIDIA 297

Query: 361 LRKIGLSEEKDKLSQRSLASLQVMYFEETVEEKLWQPTFIMEHPTEISP---LARANDER 417
           + K    E  + LS+ +         E  V +++    FI E PT+  P   L   +D +
Sbjct: 298 IAKGVEIEWGEDLSRAA---------ERAVGDEMGGLYFITEWPTQTRPFYTLPHKHDNK 348

Query: 418 PEVTERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDGGDDEAMYYDHDFVRALEY 477
             V + F+L     E  +G   ++  +        Q  +  G + ++      ++ A +Y
Sbjct: 349 --VCKAFDLMYKELEISSGAQRVHKYD-----LLVQNISNMGLNPDSF---ETYLEAFKY 398

Query: 478 GMPPTGGCGIGIDRLMMLLTDSPSIRDVILFPALRR 513
           GMPP  G G+G DR  M+LT   +IR+ +LFP  R+
Sbjct: 399 GMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDRQ 434