Pairwise Alignments

Query, 228 a.a., Ribonuclease III (EC 3.1.26.3) from Variovorax sp. SCN45

Subject, 225 a.a., ribonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  181 bits (459), Expect = 1e-50
 Identities = 108/214 (50%), Positives = 131/214 (61%), Gaps = 5/214 (2%)

Query: 12  LQHTFSDQRLLQLALTHRSFSADHNERLEFLGDSVLNLAVSHLLYIRLSALPEGDLSRVR 71
           L + F    LL+ ALTHRS ++ HNERLEFLGDS+L++ +S  LY +     EGDLSR+R
Sbjct: 14  LGYQFQQIALLEQALTHRSAASKHNERLEFLGDSILSIVISDALYHQFPKATEGDLSRMR 73

Query: 72  ANLVKQDTLHRLAVGLALSPLLKLGEGEARSGGPNRPSILADALEALIGAVYLDAGFAAA 131
           A LV    L  +A    L   LKLG GE +SGG  R SILADA+EA+IGA+YLDA     
Sbjct: 74  ATLVCGKMLAEIAKEFKLGDYLKLGPGELKSGGFRRESILADAMEAIIGAIYLDADIETC 133

Query: 132 QALVHRLYEA--VEINPRMEAAAKDPKTELQEWLQGHKMKLPVYRVAATLGAAHKQTFDV 189
           + LV   Y++    I P      KDPKT LQE LQG K  LPVY V    G AH QTF V
Sbjct: 134 RTLVLNWYKSRLAVIEP---VNQKDPKTLLQEHLQGFKQPLPVYTVVNISGEAHAQTFTV 190

Query: 190 ECEVPELGLRERGIGGSRRAGEQAAAAAMLIRLK 223
           EC+V +L     G+  SRR  EQ AAA +L R+K
Sbjct: 191 ECKVEQLKEAVIGVANSRRKAEQIAAAEVLERIK 224