Pairwise Alignments

Query, 493 a.a., HtrA protease/chaperone protein from Variovorax sp. SCN45

Subject, 385 a.a., PDZ/DHR/GLGF from Synechococcus elongatus PCC 7942

 Score =  229 bits (583), Expect = 2e-64
 Identities = 144/346 (41%), Positives = 196/346 (56%), Gaps = 43/346 (12%)

Query: 47  VDQVGPSVVNIRTVEKVTPRAGNGEMDEEMQEFFRRFFGQPLPGAPRSGPRPNRPQQPQE 106
           V++ G +VV I    +V+    NG+            FG    G P  G R  R      
Sbjct: 64  VERDGAAVVRINASRRVS----NGDP-----------FGGLFGGPPAGGNRVER------ 102

Query: 107 EERPRGVGSGFILTADGYVMTNAHVVEDASEVLVTLPDKREFKAKIVGADKRSDVAVVKI 166
                G GSGFI  ++G +MTNAHVVE A  V V L D R +  +++GAD  +DVAVVKI
Sbjct: 103 -----GSGSGFIFDSNGLLMTNAHVVEGADRVQVRLKDGRTYDGQVLGADPVTDVAVVKI 157

Query: 167 EATGLPAVKVGDISKLRVGEWVMAIGSPFGLENTVTAGIVSAKQRDTGEY------LPFI 220
           +A  LP V++G+   LR GEW +AIG+P GL+NTVT GI+SA  R + E       + FI
Sbjct: 158 DAKDLPTVRIGNSDNLRPGEWAIAIGNPLGLDNTVTVGIISATGRSSSEVGIPDKRVGFI 217

Query: 221 QTDVAINPGNSGGPLINMRGEVVGINSQIYSRSGGFMGISFSIPIDEAIRVSDQLRTSGR 280
           QTD AINPGNSGGPL+N  GEV+GIN+ I  R+ G  GI F++PI+ A R++DQ+  +G+
Sbjct: 218 QTDAAINPGNSGGPLLNAAGEVIGINTAI--RADG-QGIGFAVPINTARRIADQIIQTGK 274

Query: 281 VSRGRIGVQIDQVTKDVAE--------AIGLGKAQGALVRGVEAGSPGEKAGVEPGDVIT 332
            S   +GVQ+  +T ++A         +I L +  GAL+  V   SP   AG+  GDVIT
Sbjct: 275 ASHPLLGVQMLPLTPEIARENNRNPNASIDLPETDGALIVQVLPNSPAAAAGIRRGDVIT 334

Query: 333 KFDGKAIEKPSDLPRLVGNTKPGTKSTLTVFRRGALRDLNVTIAEI 378
             +G+ I   SDL   V   K G +  L + R+   R + V +AEI
Sbjct: 335 AAEGQPIRSASDLQTAVEKKKVGDRLALELLRQQQKRQVTVQLAEI 380



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 436 AARAGLREGDIILAVGNSDISNAREFESAIGK 467
           AA AG+R GD+I A     I +A + ++A+ K
Sbjct: 322 AAAAGIRRGDVITAAEGQPIRSASDLQTAVEK 353