Pairwise Alignments

Query, 225 a.a., RNA polymerase sigma factor RpoE from Variovorax sp. SCN45

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 85.9 bits (211), Expect = 6e-22
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 27  EVDFQLVQRTVAGDQKAFELLVIKYQRRIERLIGRMVRDVDLIEDIAQETFIRAYRALHQ 86
           E D  L    +A D   F  ++  + R++ R+   ++R+    ED+ QE ++RA+     
Sbjct: 5   ETDLCLNAPPLAQDLARFRAIMQAHNRKLYRIARSILRNDSDAEDVLQEAYVRAFTRFED 64

Query: 87  FRGEAQFYTWLYRIAVNTAKKALVDMKRDPTVSEAALRPSSEDEDETYRPGNEPTTDETP 146
           FRG+A   TWL RI +N A   L   +R   +++  +R S E E   + P N   +D  P
Sbjct: 65  FRGDAAITTWLARIVINEALGRLRKGRRQMRLAK-YMRQSQEAEIIAF-PLNSGISD--P 120

Query: 147 ESVLAANEIARAVEAAMEALPAELRQAVTLREIEGMSYEEIAEVMDCPIGTVRSRIFRAR 206
           E  +A  +I   VE   + LP   R    LR IEG+  EE A ++     T R+R+ RAR
Sbjct: 121 EKTMAQRQILDLVERLTDDLPDTYRTVFVLRVIEGLDNEEAAALLGLKPETARTRLHRAR 180

Query: 207 ----EAISARVKPLL 217
               E +  ++ P+L
Sbjct: 181 RILKEQLERQIGPVL 195