Pairwise Alignments

Query, 338 a.a., Periplasmic serine proteases (ClpP class) from Variovorax sp. SCN45

Subject, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 8/251 (3%)

Query: 83  AKTTAHTAVVEIKGEIANGGDASAEFVVAAMKTAFEDEGAKGVILLINSPGGSPVQAGII 142
           +K   H  V++  G I     AS    V+A+    +      V+L + + GG     G+ 
Sbjct: 101 SKRDPHLFVLDFHGSIDAKEVASLREEVSAILAVAQ--AGDEVLLRLETGGGMVHGYGLA 158

Query: 143 NDEIKRLKAKYKKPIYAVVEETCASAAYYIAAATDKIYVDKASIVGSIGVLMDGFGFTGV 202
           + ++ RLKA    P+   V++  AS  Y +A   DKI     +IVGSIGV+     F  +
Sbjct: 159 SSQLDRLKAA-GLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKL 217

Query: 203 MEKVGVERRLLTAGENKGFLDPFSPMSDAQRAHAQTMLNQIHAQFINVVKTGRGDRLKLD 262
           ++K  +E   LTAGE K  L  F   +D  R   +  L + H  F + +   R  R  LD
Sbjct: 218 LKKNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFI---REHRPALD 274

Query: 263 TPGLFSGLFWSGEQAVEYGLADQLGNVDYVAREVIKADEV--IDYTRRDNVAEKLAKKFG 320
              + +G  W G QA   GL D++   D +     K+  V  + YT++  +A+KLA   G
Sbjct: 275 LDKVATGEHWFGTQAKALGLVDEIQTSDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAG 334

Query: 321 ASMAETTVRLM 331
            +     ++L+
Sbjct: 335 DAADNVLLKLI 345