Pairwise Alignments

Query, 338 a.a., Periplasmic serine proteases (ClpP class) from Variovorax sp. SCN45

Subject, 308 a.a., signal peptide peptidase SppA from Methanococcus maripaludis S2

 Score =  103 bits (256), Expect = 7e-27
 Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 14/250 (5%)

Query: 64  LAFFIFLAWL--ALSRSAPSTAKTTAHTAVVEIKGEIANGGDASAEF---------VVAA 112
           +A F+ +A L   L     S   ++ + A++ I G I      S  F          V  
Sbjct: 9   IAVFLIIAILMVGLLVFVSSDGISSKNIALINIDGTITLESSDSGLFSSIQPGVNDYVEW 68

Query: 113 MKTAFEDEGAKGVILLINSPGGSPVQAGIINDEIKRLKAKYKKPIYAVVEETCASAAYYI 172
           +  A  ++  K VI+ INSPGG  V +  ++ +IK +  K  KP+ A +E   ASAAY  
Sbjct: 69  LDDAENNDNIKAVIIKINSPGGGAVASEKLSRKIKEVSEK--KPVVAYIENMGASAAYQA 126

Query: 173 AAATDKIYVDKASIVGSIGVLMDGFGFTGVMEKVGVERRLLTAGENKGFLDPFSPMSDAQ 232
           A++T+ I  ++ ++VGSIGV M+   + G+MEK+G+    +T G+ K    P   M++ +
Sbjct: 127 ASSTNYIVAERQAVVGSIGVRMELIHYYGLMEKLGINTTSITGGKYKDIGTPTRSMTEEE 186

Query: 233 RAHAQTMLNQIHAQFINVVKTGRGDRLKLDTPGLFSGLFWSGEQAVEYGLADQLGNVDYV 292
            A  ++M+N+ + +F++ V   R   +  +T  +  G  +SG QA   GL D  G  D  
Sbjct: 187 YAMLESMVNESYYEFVSWVAENRNMTIN-ETLEVADGKIYSGTQAQRVGLVDITGTEDDA 245

Query: 293 AREVIKADEV 302
               +K   +
Sbjct: 246 VDMAVKLGNI 255