Pairwise Alignments

Query, 1068 a.a., Ribonuclease E (EC 3.1.26.12) from Variovorax sp. SCN45

Subject, 502 a.a., ribonuclease G (RefSeq) from Shewanella amazonensis SB2B

 Score =  271 bits (694), Expect = 7e-77
 Identities = 171/476 (35%), Positives = 261/476 (54%), Gaps = 11/476 (2%)

Query: 4   MLINATQAEERRLAIVDGQKLLDYEIEIEGREQRKGNIYKAVVTRVEPSLEACFVDYGED 63
           +LIN T   E R+A+V+   L +  IE   +    GNIYK  ++RV P ++A FVD G D
Sbjct: 19  LLINVTP-NEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIGLD 77

Query: 64  RHGFLPFKEISKQYFA----EGVSASQARIQDAIREGQELTVQVEKEERGNKGAALTTFI 119
           +  FL   +I          E  +     I + +R+GQ++ VQV K+  G KGA LTT I
Sbjct: 78  KAAFLHASDIMPHTECVADVEKGNFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLTTDI 137

Query: 120 SLAGRYVVLMPNNPRGGGVSRRIEGDD-RAELKEAMDQLEYPKGMSIIARTAGIGRSAPE 178
           +L  RY+V MP +   G VS+RIE +D R  LKEA        G  II RTA  G  A E
Sbjct: 138 TLPSRYLVFMPGSAHVG-VSQRIESEDERTRLKEATLPFVDEDGGFII-RTAAEGAGAEE 195

Query: 179 LQWDLNYLLKLWSAIDGAAKGGKGAFLIYQESSLVIRAIRDYFNHDIGDILIDTDDIYDQ 238
           L  D  +L ++W+ +    K  KG+ L+YQ+ +L +R +RD+   D+  I +D+   +++
Sbjct: 196 LAQDAAFLRRVWAKVAERRKR-KGSSLLYQDLALPVRIVRDFVGTDLDRIQVDSRSTFEE 254

Query: 239 AQQFMAHVMPEHAARVKRYRDDAALFSRFQIEHQIESAYARTVQLPSGGAIVIDHTEALV 298
            + F    MPE   +++ Y     +F  + +E++I+ A  R V+L SGG ++ID TEA+ 
Sbjct: 255 LKHFAQEFMPEFEEKIELYSGSVPIFDLYDVENEIQRALGRKVELKSGGYLIIDQTEAMT 314

Query: 299 SVDVNSARAIKGGDIEETATRTNLEAADEVARQMRLRDLGGLIVIDFIDMDESKNRREVE 358
           +VD+N+   +   ++EET   TNLEA   +ARQ+RLR+LGG+I+IDFIDM    +R+ V 
Sbjct: 315 TVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMLSEDHRQRVL 374

Query: 359 SRLRDALRQDRARVQFGSISKFGLMEMSRQRLKPALSEGSSIPCPRCGGSGHIRDTESSA 418
           S L  AL  DR +      S  GL+EM+R+R + +L       CP C GSG+++  E+  
Sbjct: 375 SSLTSALAHDRVKTNVSGFSGLGLVEMTRKRTRESLEHVLCGECPACKGSGYMKTVETVT 434

Query: 419 LQILRIIQEESMKDNTAAVHVQVPVEVASFLLNEKRPEIAKIE--LKQRVTVLMVP 472
            +I R I       +     V     V + L  ++   +A++E  + +R+ V M P
Sbjct: 435 YEIFREIIRLDKAYDADEFLVYCAPAVHACLSGDEHHHVAELEVYIGKRIRVQMEP 490