Pairwise Alignments

Query, 251 a.a., Response regulator receiver:LytTr DNA-binding region from Variovorax sp. SCN45

Subject, 237 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  101 bits (251), Expect = 2e-26
 Identities = 81/248 (32%), Positives = 128/248 (51%), Gaps = 21/248 (8%)

Query: 6   LKTLIVDDEALARSRLRTLLRDCNSPGAEVVAEAAQGAEAQQQLATLALDLVLLDVHMPG 65
           L  L++DDE  AR  L  LL +  S   EV+ +A+   E  +++  L  D+V LD+ MP 
Sbjct: 2   LSALLIDDERFAREELAELLAE--SGQIEVIGQASNAIEGLKKINQLKPDVVFLDIQMPQ 59

Query: 66  IDGIEVARALRSRADAPAVVFVTAHAAHAVTAFDLDAVDYLTKPVRAERLQQALQKAERF 125
           I GIE+   L      P VVFVTA+  +A+ AF+ +A DYL KPV  ERL + +Q   R 
Sbjct: 60  ISGIELLSMLDPET-MPEVVFVTAYDQYALQAFEDNAFDYLLKPVDTERLAKTVQ---RL 115

Query: 126 LKERRALQAEAAPETVLIQDR------GRAERVPLSEVLYLKSEYKYLTVRTATRSHILD 179
           L++ +  +++ +P T    D+       R   +P++EV +  S+   + V+TA +     
Sbjct: 116 LRQHK--KSDYSPLTQPSLDQIPCTGLNRIVLLPINEVEFAYSDISGVNVQTAQQKATSQ 173

Query: 180 GSLNEFEERYPHRFLRVHRNALVARAAIRALEKYDDGEDAEGWALRLDAIPEPVAVSRRQ 239
            +L   EE+     +R HR  LV   AIR ++  ++     G A  +      V VSRR 
Sbjct: 174 LTLKVLEEK--TALVRCHRQYLVNLKAIREIKLLEN-----GLAEMITHAGHKVPVSRRY 226

Query: 240 LAAVREVI 247
           L  ++E++
Sbjct: 227 LKELKEML 234