Pairwise Alignments

Query, 251 a.a., Response regulator receiver:LytTr DNA-binding region from Variovorax sp. SCN45

Subject, 257 a.a., DNA-binding response regulator LytR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 77/231 (33%), Positives = 111/231 (48%), Gaps = 22/231 (9%)

Query: 5   TLKTLIVDDEALARSRLRTLLRDCNSPGAEV-VAEAAQGAEAQQQLATLALDLVLLDVHM 63
           T++ L+VDDE  AR  L  LL    S  A+V   EAA   EA   +A+   DLV  D+ M
Sbjct: 2   TIRALVVDDERPARDELVYLL----SAHADVETMEAASAGEALSLIASHHPDLVFQDIEM 57

Query: 64  PGIDGIEVARALRSRADAPAVVFVTAHAAHAVTAFDLDAVDYLTKPVRAERLQQALQKA- 122
           PG  G +V +A     + P  VFVTA   HA+ AFD +A DYL KPV  ERL + L++  
Sbjct: 58  PGRGGFDVLQAASLMTNPPVFVFVTAFDQHAIRAFDENAADYLLKPVAPERLARCLERVR 117

Query: 123 ERFLKERRALQAEAAPETVL-------------IQDRGRAERVPLSEVLYLKSEYKYLTV 169
           +R   +  + Q E   + +L             ++  GR   VP  EV+ +++E K + V
Sbjct: 118 QRLAPDGGSTQVEDMMDRLLARIGRERPLPRIAVEQGGRIHLVPTPEVVLIEAEEKRIAV 177

Query: 170 RTATRSHILDG--SLNEFEERYPHR-FLRVHRNALVARAAIRALEKYDDGE 217
            T        G  SL   E+R   + F R +R  LV    +     + +G+
Sbjct: 178 VTEAGRFTCHGAQSLARIEDRLAGQPFFRANRAVLVNLERVAEFSPWYNGK 228