Pairwise Alignments

Query, 414 a.a., RND efflux system, membrane fusion protein from Variovorax sp. SCN45

Subject, 373 a.a., acriflavin resistance protein from Sinorhizobium meliloti 1021

 Score =  178 bits (451), Expect = 3e-49
 Identities = 119/364 (32%), Positives = 184/364 (50%), Gaps = 6/364 (1%)

Query: 19  AALAACSRTSVETSGTSKAAAAPGKEVGTVTLKHETLAQSTELPGRTAAPVIAEIRPQVG 78
           AAL+    T++     +  A  P   V         L +S +L G+  A    +IR +V 
Sbjct: 9   AALSCGLLTTIGIVAGNAYAQQPPPAVNVAPAAIMDLRESVDLTGKVVAVQKVDIRARVS 68

Query: 79  GILKERLFTEGSQVKAGQVLYQLDPAPLQAAHASAQASVRKAESALATARTVARRNAELV 138
           G L++  F +G +V AG VLYQ++    +AA      S+  AE+    A     R   L+
Sbjct: 69  GFLEKVNFEDGQKVSAGTVLYQVEDGAYRAALQEIDGSIAAAEAQRDLAVLERDRAQRLI 128

Query: 139 KIDAISRQVFDESQAAEQQAEADLGVARAAEQTARIQLGYTRITSPIAGWAELSTVTPGA 198
             + +++   D + A  ++AEAD+   + ++Q A + L YT+I +P  G   L+TV  GA
Sbjct: 129 ATNTVAQATLDTANAQVKKAEADILRLKGSKQNAELNLSYTKILAPFDGVVGLTTVDVGA 188

Query: 199 LVTANQAAALTTVQQLDPIHVHVTQSSRELLRLKRELASGRLQRASDAEARIQLVLEDGS 258
           LV A  + +L T+ +LDPI+V    ++      +  +  G +     + A + + L +G+
Sbjct: 189 LV-APDSGSLVTLTRLDPIYVEFPVATSLYFSYRERVEKGEM----SSGANVSITLPNGT 243

Query: 259 KYPHAGRLTFSGVTVDAGTGSVTLRAVVPNPDKLLMPGMYVRAVLQEGTDATALLVPQQA 318
            YP  G + F   TV  GT +VT+RA  PNP   L+ G  VR VL++      L VPQQA
Sbjct: 244 DYPEKGTIDFVASTVSQGTDTVTVRAEFPNPGGTLLDGTLVRVVLEQSDPQDVLAVPQQA 303

Query: 319 VTRAPDGSASALVVDAENKVAKRPIQVGRAVGTRWQVLEGLAAGDRVMTEGSQRVKVGEK 378
           V R   G A  +VVDA +KV  R + V R+   +  V +GL  G+ V+TEG  +V+ G  
Sbjct: 304 VQRDQQG-AFVMVVDANSKVELRRVDVSRSSRGQAVVAKGLKEGENVITEGVGKVRPGIV 362

Query: 379 VKVV 382
           V  V
Sbjct: 363 VDAV 366