Pairwise Alignments

Query, 382 a.a., Lipid-A-disaccharide synthase (EC 2.4.1.182) from Variovorax sp. SCN45

Subject, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (649), Expect = 3e-72
 Identities = 143/375 (38%), Positives = 208/375 (55%), Gaps = 3/375 (0%)

Query: 8   RFALVAGEASGDLLAGLLLDGLQARWPDLQTVGIGGPRMLAHGFQSWWPQEKLAVRGYVE 67
           R  +V GE SGD L    +  ++AR+PD + VGIGGP+M A G QS +  E+LAV G VE
Sbjct: 6   RIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLVE 65

Query: 68  VLRHYAEIAGIRRQLKARLLREWAELFIGVDAPDFNLDLEAGLRSRGMKTVHFICPSIWA 127
           VL     +  ++ +L         ++F+G+DAPDFNL LE  L+  G+KTVH++ PS+WA
Sbjct: 66  VLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAGIKTVHYVSPSVWA 125

Query: 128 WRPERIEKVRAAADHVLCIFPFEPALLAEHGVAGSYVGHPLANVIPMTPDRAGARAAMGF 187
           WR  RI  + AA   VL   PFE A   +  V   ++GH LA+ IP+  D+  AR  +G 
Sbjct: 126 WRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQLLGL 185

Query: 188 APDAQVVALLPGSRRSEVRYLAARFFAAAALMQKERPGVQFVAPII-PSLRAEVEGLLHA 246
               + +A+LPGSR SE++ LA  F A    +Q   P + FV  ++    RA+ E     
Sbjct: 186 DEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQAWQQ 245

Query: 247 SGMTGRVKLLDGQSHAALAACDATLIASGTATLEAALFKRPMVIAYNMNALSWRLMQRKQ 306
                   L+D  +   + A DA ++ASGT  LE  L KRPMV+ Y +NA +  L +R  
Sbjct: 246 VAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTAFLAKRLL 305

Query: 307 LQPWVGLPNILCRDFVVPELLQEAATPEALAKATLAWLDAPEKTQALQQKFSELHVQLQR 366
             P+V LPNIL  + +V ELLQ+  T + L       L++    QAL  KF+E+H  +++
Sbjct: 306 KTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLES--DNQALMDKFTEMHQWIRK 363

Query: 367 DTPTLCADAIQKVLE 381
           D     A A+  +++
Sbjct: 364 DADQQAAQAVLHLIQ 378