Pairwise Alignments

Query, 261 a.a., RNA (nucleoside 2'-O)-methyltransferase from Variovorax sp. SCN45

Subject, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)

Query: 118 VVLDRLQDAGNAGSILRSAAAFGFTQVIALKGTAALWAPKVLRAGMGAHFGLRLIEGVEA 177
           +VLD + D  N G+ LR+A A G   VI  K  +A     V +   GA   + L+     
Sbjct: 99  LVLDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNL 158

Query: 178 ----EALDALTVPLLATSSHRGEWLHKADLPHPCAWLMGHEGQGVSAALEARATHHIRIA 233
                AL    V  + T+      ++++ L    A +MG EG G+           I+I 
Sbjct: 159 ARTMRALQEKGVWFVGTAGEATHDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIP 218

Query: 234 QPGGEESLNVAAAAAICL 251
             G   SLNV+ A  +CL
Sbjct: 219 MAGSVSSLNVSVACGVCL 236