Pairwise Alignments

Query, 465 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (293), Expect = 8e-31
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 21/295 (7%)

Query: 169 LLKVVLPIMAITVTATLLATHFVVRRTLAGLNAAAARAGQIDADQRGVRLPLSDVPGEVA 228
           L +++L +  I V   L+   F   + +  L AA A       D+  V  P      E+ 
Sbjct: 159 LPQLILILCLIVVLVVLIERSF---QPIQALKAAIALRSIHKLDRIYVEKPTV----ELL 211

Query: 229 TLVAAFNDALQRLDDGHARHERFLADAAHELRTPLAILNTRLDNLPDSAEKTRLLADAAR 288
            LV   N  L  L+    R +RF   AAHEL+TPL +L    +N   S  + +L  D  R
Sbjct: 212 PLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENALRSTNQEQLKQDLER 271

Query: 289 L-------SVLAGQLLDLQRMKGREE-RRQRVDLVDMAREVVAEMAPLALASGYDISFEP 340
           +         L  QLL L +++  +  R+Q V+L ++ ++V+A++AP+A      +SF  
Sbjct: 272 IFKGIERTDRLIHQLLMLAKVESTQTLRKQPVELANVIKQVIADLAPIAFKQDQQLSFHG 331

Query: 341 QAGRVEIDGDRDALSRALTNLVRNAIDHAGGQGSVVVRV---DASGDVDVIDDGPGIPPA 397
           ++ R  + GD   L     NL+ NAI ++G    + V +   D   +V V D G  I   
Sbjct: 332 ESSR--LWGDELLLGILFKNLLDNAIRYSGHSSQIAVELSDHDGEIEVRVSDTGAAIDDL 389

Query: 398 QRAHVFKPFYRVHA-SGPGAGLGLSLVQEIVRLHGGEVSVHDGPEGGALFRMRFR 451
            R  +F  FYR ++  G GAGLG+S+ ++I  LHGG+V +    +    F +RFR
Sbjct: 390 TREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQVLLLPRTDERNTFVVRFR 444