Pairwise Alignments

Query, 1082 a.a., Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) from Variovorax sp. SCN45

Subject, 1081 a.a., carbamoyl-phosphate synthase large subunit from Methanococcus maripaludis S2

 Score = 1058 bits (2736), Expect = 0.0
 Identities = 556/1093 (50%), Positives = 761/1093 (69%), Gaps = 35/1093 (3%)

Query: 3    KRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPATAD 62
            KR D+K ++I+G+GPI+IGQA EFD+SG QACK+L+EEG   IL+NSNPATI TD   AD
Sbjct: 2    KREDIKKVMILGSGPIVIGQAAEFDFSGSQACKSLKEEGIYTILVNSNPATIQTDTNIAD 61

Query: 63   VTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRNGVLDKYTGAATNKPVEL 122
              Y+EP+  + +EKII KE+PDAILPTMGGQT LN A++L + G+L+K+        VEL
Sbjct: 62   KVYLEPLNPKILEKIIEKEQPDAILPTMGGQTGLNLAMELSKRGILEKHG-------VEL 114

Query: 123  IGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVGFPTVIRPSFTLG 182
            +G+T   I+ +EDR  F  AM +I    A+S   HS++EA    K +G+P ++RP+FTLG
Sbjct: 115  LGSTESVIETSEDRDLFNKAMEEINQPIAKSAAVHSVEEAIGATKELGYPAIVRPAFTLG 174

Query: 183  GTGGGIAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIE 242
            GTGGGIA N EE   I K+G++ S   ++LI++SLLGWKEYE EV+RDK D CI+VC++E
Sbjct: 175  GTGGGIANNEEELIEITKKGLKYSMIKQVLIDQSLLGWKEYEYEVMRDKNDTCIVVCNME 234

Query: 243  NLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM 302
            N+DPMG+HTG+SI  AP+QTLSD+ +Q LR+ASL ++R + ++ GG NVQF++NP+    
Sbjct: 235  NIDPMGIHTGESIVTAPSQTLSDEFHQKLRDASLQIIRHLKIE-GGCNVQFAVNPEMTDY 293

Query: 303  VVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYV 362
            VVIE+NPRVSRSSALASKATG+PIAK+AAK+A+G TLDE++N++T   TPASFEP+IDYV
Sbjct: 294  VVIEVNPRVSRSSALASKATGYPIAKIAAKIAIGRTLDEIQNDVT-KETPASFEPTIDYV 352

Query: 363  VTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNEKTQD 422
            V KIPR+ F+KF   D +L T MKS GE+MA+GR  +E+ QKA+R L++G  G+    +D
Sbjct: 353  VVKIPRWPFDKFRTVDKKLGTSMKSTGEIMAIGRNLEEALQKAVRSLDIGRFGIIADGKD 412

Query: 423  REVLEKE----LGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIELEL 478
            +E    E    L     ER++ +  A   G SVD +   T I+P+F+ +I++I+  + EL
Sbjct: 413  KEYSNSEIVDILEHATDERLFVIAYALDKGWSVDGICERTGINPFFIEKIKKIIDCKKEL 472

Query: 479  ETKSLDDID----RDTLLALKKKGFSDRRLARQLKTTDTAIREKRRALGVRPVYKRVDTC 534
            E  S   +D    ++ LL  K  GFSD ++++    T+  IR+ R+ L V PVYK VDTC
Sbjct: 473  EVISRIPVDDEKLKEILLKAKSLGFSDVQISKIFSKTENEIRDLRKRLEVIPVYKMVDTC 532

Query: 535  AAEFATNTAYMYSTY-----EDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALA 589
            AAEF   T Y YS Y     E++ E+  +D+KK+++LG GP RIGQG+EFDY  VHA  A
Sbjct: 533  AAEFEAKTPYYYSAYERYFDEEQNESVSSDRKKVIILGSGPIRIGQGVEFDYSTVHAIFA 592

Query: 590  MREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKP----LGVIVQYGG 645
            ++E G E I+VN NPETVSTDYDTSD+LYFEPL  E+++ I++ E      LGVIVQ+GG
Sbjct: 593  LKELGIEAIIVNNNPETVSTDYDTSDKLYFEPLVYEEIMNIIENENKNGQLLGVIVQFGG 652

Query: 646  QTPLKLALDLEANGVPIIGTSPDMIDAAEDRERFQKLLHELKLLQPPNATARTEAEALEK 705
            QT + LA+ L  +GV I+GTSP  ID AEDR++F  +L +LK+ Q   ATA +E +AL+ 
Sbjct: 653  QTAINLAMKLYNSGVNILGTSPQSIDLAEDRDQFIHVLEKLKIPQADGATAFSEEQALKV 712

Query: 706  AAALGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDV 765
               +GYP +VRPSYVLGGRAM+IV+   DL+ YMREAVKVS+D P+L+D+FL +AVE DV
Sbjct: 713  VERIGYPALVRPSYVLGGRAMQIVYNTEDLKDYMREAVKVSSDHPILIDKFLEEAVEVDV 772

Query: 766  DCLRDAEGQTLIGGVMEHIEQAGVHSGDSACSLPPYSLSADTVAELKRQSAAMAAALNVV 825
            D + D E    IG +MEHIE+AG+HSGDSAC +PP +LS + + ++   +  +A  L V+
Sbjct: 773  DAVCDGE-SVFIGAIMEHIEEAGIHSGDSACVIPPQTLSKEVIEKIAEHTTKLALELGVI 831

Query: 826  GLMNVQFAIQQKDGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQGV 885
            GL+N+Q+A+  KDG  V+Y++E NPRASRT+PYVSK+ G+ LAK+A   + G+ LK  G 
Sbjct: 832  GLLNIQYAV--KDG--VVYIIEANPRASRTIPYVSKSVGVPLAKIATNAIMGKKLKEMGY 887

Query: 886  TKEVTPPYFSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTHL 945
                   Y SVKEAVFPF+K PGVD +L PEMKSTGE +G+ + FG+AF KSQL A   L
Sbjct: 888  FGLAKSKYVSVKEAVFPFLKLPGVDPVLSPEMKSTGEAIGIDQDFGKAFYKSQLSANMEL 947

Query: 946  PKSGKVFISVKNNDKARAVEVARGLVKLGFVLTATKGTAAAINAAGIECATVNKVTEGRP 1005
            P SG VFISV+N DK    ++A+    LGF + AT+GTA  +    I    V K++E   
Sbjct: 948  PTSGTVFISVRNRDKDNITKIAKKYHNLGFEIVATRGTARELRLFDIPVREVRKISESMQ 1007

Query: 1006 H-IVDMIKNNEIALVINTVEERRNAITDSRQIRTSALLARVTTFTTIFGAEAAVEGMGFM 1064
            + ++D+++  E+ L+INT      A TD   IR +A+   +   TT+ GA AA++ +  +
Sbjct: 1008 NSVLDLMQKGEVDLIINT-SSGDKAKTDGYFIRRAAVELNIPCMTTLQGAYAAIKAIEAI 1066

Query: 1065 --DELGVISVQEM 1075
               ELGV S+ E+
Sbjct: 1067 KSGELGVYSLNEL 1079