Pairwise Alignments

Query, 255 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 260 a.a., Alkanesulfonates transport system permease protein from Pseudomonas fluorescens FW300-N2E2

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 7/236 (2%)

Query: 22  IVLAVLWEKSVDVFGIKRYLLPPLSQVLDSLWSNRMALLAQSW----VTTQEVLAGFALA 77
           ++L  +W+ SV    +   +LP    V+++     +    + W    ++      GF + 
Sbjct: 15  LLLLAVWQLSVSTGWLSTRILPAPVAVIEA--GANLVRSGEIWTHLAISGWRAAVGFLIG 72

Query: 78  AIGGVLLGLAIHAVPVVRRMLYPLIVVFQGLPKIALAPLMVIWFGYGDTSKILMAFLFAF 137
              G+ LG          R+L   + + + +P +AL PL+++WFG  +++KI +  L   
Sbjct: 73  GGIGLALGFITGLSKWGERLLDSSVQMLRNIPHLALIPLVILWFGIDESAKIFLVALGTL 132

Query: 138 FPVVIATMGGLAGTPAHLVEHFRAIRAPAWTTFRRLYVPSALPSIMDGCKSAMPLAVIGA 197
           FP+ + T  G+      LVE  R+        FR++ +P ALPSI+ G + A+    +  
Sbjct: 133 FPIYLNTYHGIRNVDPALVEMSRSYGLSGLRLFRQVILPGALPSILVGVRFALGFMWLTL 192

Query: 198 IVGEFVGSERGLGHLILEANANARTDYLFAALVVISAVAGLLYVLVELAAKRVWWR 253
           IV E + +  G+G+L + A    +TD +  A +++ AV G L  L     +RVW R
Sbjct: 193 IVAETISASAGIGYLAMNAREFLQTDVVVLA-ILLYAVLGKLADLAARGLERVWLR 247