Pairwise Alignments

Query, 347 a.a., Twitching motility protein PilT from Variovorax sp. SCN45

Subject, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

 Score =  268 bits (685), Expect = 2e-76
 Identities = 146/335 (43%), Positives = 218/335 (65%), Gaps = 2/335 (0%)

Query: 1   VDITQLLAFSVKNKASDLHLSAGLPPMIRVNGDVRRINVDALDHKGVHAMVYDIMSDTHR 60
           +++ Q L   + +KASDL+++ G P + RV+G++R    +AL    V A+++ +M D  +
Sbjct: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59

Query: 61  KHYEEFLEVDFSFEIDGLARFRVNAFNQARGAAAVFRTIPSKILTLEQLNAPKIFGELAL 120
             +++  E +F+   D   RFRV+AF Q     AV R I ++I T E+L  P++   LA+
Sbjct: 60  AEFKQTREANFAVVRDS-GRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118

Query: 121 KPRGLVLVTGPTGSGKSTTLAAMVNYLNENEYGHILTVEDPIEFVHESKKCLINQREVGP 180
             RGLVLV G TGSGKSTT+AAM  Y N++  GHILTVEDPIEFVHE K+C++ QREVG 
Sbjct: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178

Query: 181 MTLSFSNALRSALREDPDAILVGELRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI 240
            T S+  AL+++LR+ PD IL+GE+R  ET+  AMT AETGHL   TLH ++A + ++RI
Sbjct: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238

Query: 241 IDVFPGEEKEMIRAMLSESLQAVISQTLCKTKDGQSRVAAHEIMLGTPAIRNLIREAKVA 300
           + + P E++E     LS +L+ VI+Q L + K+G+ R    E++L +P I +LIR  ++ 
Sbjct: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298

Query: 301 QMYSTIQTGQGQGMQTLDQNLTELVRRNTISAAEA 335
           ++ +T+   Q  GMQT DQ L +LV  + IS  +A
Sbjct: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDA 333