Pairwise Alignments

Query, 347 a.a., Twitching motility protein PilT from Variovorax sp. SCN45

Subject, 345 a.a., twitching motility protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  499 bits (1284), Expect = e-146
 Identities = 256/339 (75%), Positives = 295/339 (87%), Gaps = 1/339 (0%)

Query: 1   VDITQLLAFSVKNKASDLHLSAGLPPMIRVNGDVRRINVDALDHKGVHAMVYDIMSDTHR 60
           ++IT+LLAFSVK+KASDLHLSAG+PPMIRV+G+VR+IN+ ALDH GVH++VYDIM+D  R
Sbjct: 1   MEITELLAFSVKHKASDLHLSAGVPPMIRVDGEVRKINLPALDHAGVHSLVYDIMNDKQR 60

Query: 61  KHYEEFLEVDFSFEIDGLARFRVNAFNQARGAAAVFRTIPSKILTLEQLNAPKIFGELAL 120
           K YEE LE+DFSFE+  LARFRVNAFNQ+RGAAAVFRTIPS+IL+LEQL AP IF ++A 
Sbjct: 61  KDYEEHLEIDFSFEVPNLARFRVNAFNQSRGAAAVFRTIPSEILSLEQLGAPDIFKKIAS 120

Query: 121 KPRGLVLVTGPTGSGKSTTLAAMVNYLNENEYGHILTVEDPIEFVHESKKCLINQREVGP 180
            PRGLVLVTGPTGSGKSTTLAAM++Y+NEN + HILT+EDPIEFVH++K+CLINQREV  
Sbjct: 121 FPRGLVLVTGPTGSGKSTTLAAMIDYVNENRHDHILTIEDPIEFVHQNKQCLINQREVHR 180

Query: 181 MTLSFSNALRSALREDPDAILVGELRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI 240
            T SF+ ALRSALREDPD ILVGE+RDLETIRLAMTAAETGHLVFGTLHT+SAAKTIDR+
Sbjct: 181 HTHSFNAALRSALREDPDVILVGEMRDLETIRLAMTAAETGHLVFGTLHTTSAAKTIDRV 240

Query: 241 IDVFPGEEKEMIRAMLSESLQAVISQTLCKTKDGQSRVAAHEIMLGTPAIRNLIREAKVA 300
           +DVFP  EK+M+R MLSESLQAVISQTL K K G  RVAAHEIM+GTPAIRNLIRE KVA
Sbjct: 241 VDVFPAGEKDMVRTMLSESLQAVISQTLIK-KIGGGRVAAHEIMMGTPAIRNLIREDKVA 299

Query: 301 QMYSTIQTGQGQGMQTLDQNLTELVRRNTISAAEARGKA 339
           QMYS IQTG   GMQTL+Q L  LV R  I+  +A  K+
Sbjct: 300 QMYSAIQTGMAHGMQTLEQCLQNLVNRGLITREDAMAKS 338