Pairwise Alignments

Query, 378 a.a., Type IV pilus assembly ATPase component PilU from Variovorax sp. SCN45

Subject, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

 Score =  258 bits (659), Expect = 2e-73
 Identities = 135/317 (42%), Positives = 203/317 (64%), Gaps = 1/317 (0%)

Query: 10  INDLLKLMVSRAGSDLFITADFPPAIKVDGKVTKVSQQALGAQHTLALTRSIMNDRQTAE 69
           I +LL+  V    SDL ++A  PP +++DG+V K+   A        L   IMND Q +E
Sbjct: 3   IAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQRSE 62

Query: 70  FERTKECNFAISPTGIGRFRVNAFVQQGKVGMVLRTIPAKLPTIDDLGMPQVLKEVTMSK 129
           +E   E +F+     +GRFRVNAF Q      V RTIP  +PT++ L  P++  ++   +
Sbjct: 63  YEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIANYE 122

Query: 130 RGLCILVGATGSGKSTTLAAMIDWRNENSFGHIVTVEDPVEFVHPHKNCVVTQREVGIDT 189
           +GL ++ G TGSGKSTTLAAM+++ N +   HI+T+EDP+EFVH +  C++ QREV  DT
Sbjct: 123 KGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHRDT 182

Query: 190 DSWEAALKNTLRQAPDVILMGEIRDRETMEHAVAFAETGHLCMATLHANSANQALDRIIN 249
            S++ AL++ LR+ PDVIL+GE+RD+ET+  A+  AETGHL   TLH +SA + +DRII+
Sbjct: 183 HSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRIID 242

Query: 250 FFPEERRAQLLMDLSLNLRSLVSQRLVPTEDGLGRVAAFEVLLNTPLISDLIFKGEVGEI 309
            FP   +  +   LS +LR++++Q+L+    G GRVA  E++L TP I +LI + +V ++
Sbjct: 243 VFPGSDKDMVRSMLSESLRAVIAQKLLKRVGG-GRVACHEIMLATPAIRNLIREDKVAQM 301

Query: 310 KEIMKKSRNLGMQTFDQ 326
             I++     GMQT +Q
Sbjct: 302 YSIIQTGAAHGMQTMEQ 318