Pairwise Alignments

Query, 369 a.a., ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

Subject, 329 a.a., Basic membrane lipoprotein (NCBI) from Rhodospirillum rubrum S1H

 Score =  141 bits (356), Expect = 2e-38
 Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 15/318 (4%)

Query: 14  AMTLAAGSALFITLPAAAADGFTLKDKPKIAMLYFGPKNDGGWTQAFDEARVKIEKEIGQ 73
           A  LAA +A    LP AA    T  D  K+A +Y  P     W     +A +   KE G+
Sbjct: 8   AAVLAAATAF--CLPGAA----TAADPLKVAAVYTVPIEQQ-WVSRIHKA-LTAAKERGE 59

Query: 74  KIQFVENVPEDASAIKPAAEKFIQRGANIVIGTAFGYSDSFKDLAAKYPDVAFLNGSG-T 132
            I +  +     +  +    ++ ++G  +VIG  FG   + + +A  YPD AFL GS   
Sbjct: 60  -IDYAYSESVANADYERVMREYAEKGNALVIGEVFGVEQAARRVAKDYPDTAFLMGSSFK 118

Query: 133 TNGSNLESFYGRTYESQYLCGMAAGAASKTGKLGFVAANPFGVVNWTVNAFALGAQKMNP 192
               N   F    +E  YL GM AG  +KT K+G V   P   VN  +NAF  GA+++NP
Sbjct: 119 PQAPNFSVFDNYIHEPSYLTGMIAGGMTKTAKIGLVGGYPIPEVNRLMNAFIAGAREVNP 178

Query: 193 NATVNVIYTGAWNDPVKERAAAAALIDQGADVIGQHVDSPTPQIVAQERGVYGTGHHRDL 252
            A+  V + G+W DP K + AA A+I++G DV+  + +       A+E+GV   G+  D 
Sbjct: 179 QASFTVSFIGSWFDPPKAKEAAFAMIERGVDVL--YAERFGVSDAAKEKGVLAIGNVIDT 236

Query: 253 RQFAPKATLCSSVWVWDRFLAPELKKIMAGNWKPAPYGAFIEMKDGGTDIAGFG---PAV 309
           +   P+  + S++W  +  +A  L+ + A  +K   Y  +  MK  G  +A +G     +
Sbjct: 237 QADYPQTVVASALWSMEPTIAKALEMVKAKTFKAEDYSVYSYMKHQGGALAPYGTFDDKI 296

Query: 310 PKDKAALITAERDAIMKG 327
           P D  A + A++ AI+ G
Sbjct: 297 PADLKAKVEAKKQAILDG 314