Pairwise Alignments

Query, 508 a.a., ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) / ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  239 bits (610), Expect = 2e-67
 Identities = 168/499 (33%), Positives = 254/499 (50%), Gaps = 20/499 (4%)

Query: 5   LELTGIRKSFDGFAALTDAHFTARWGEVHALLGENGAGKSSLMNIAAGLYAPEAGQLLVD 64
           L L+ I K+F G  AL  A      G V AL+GENGAGKS+LM +  G+Y+ +AG +   
Sbjct: 6   LALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEYQ 65

Query: 65  DNAVRFAGPRDAARQRIGMVHQHFKLVRPFTVAQNILLTAPPPVGFQSHGERL-REIERD 123
              V F GPRD+    I ++HQ   L+   T+A+NI L       F   G  L  E+ R 
Sbjct: 66  GQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPF---GRILWDEMHRK 122

Query: 124 IRNKASELGFDIDPSKRVDALSIAEQQRVEILKVLLAGARILILDEPTAVLTDQEAARLL 183
                + L         +  LS+ EQQ VEI K L   ++++I+DEPT  LTD E   L 
Sbjct: 123 ADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLF 182

Query: 184 QTVQGLARKGAAVVLVTHKMADVKTYADRVTVMRGGRTVATLNPADTTAAELVKLTVGES 243
             +  L  +G  +V ++H++ ++    D +TV+R G+ +      DT    L+++ VG  
Sbjct: 183 NVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRK 242

Query: 244 IASQGFQAPAASRGPVRLTVRGLRTPASPEGRRVLDGVDLELHAGEIYGLAGVGGNGQGE 303
           +  Q +   AA +G + L V GL       G  V D V   L  GEI G++G+ G G+ E
Sbjct: 243 LEEQ-YPRIAAQQGDISLEVIGL------TGSGVHD-VSFTLKKGEILGVSGLMGAGRTE 294

Query: 304 LAGAIMG-LPGEATEGEIRLEGHGDLKTMAASTRRGIGIAAIPADRYGLALAGGLSVAEN 362
           L   I G LP E   G I L G   +  ++       GIA I  DR G  L  GLSV EN
Sbjct: 295 LMKVIYGALPSE--RGVINLNGR-TVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKEN 351

Query: 363 YAIGRVHTGRYGPVWRLRRGRIQADTQEAVRAFDVQGVRSVAQKAALLSGGNAQKLVLAR 422
            ++  +     G   ++R         + +R F+++   S  Q    LSGGN QK+ +A+
Sbjct: 352 MSLCALDQLSKGV--QIRHADEVIAVDDFIRLFNIK-TPSREQIIGNLSGGNQQKVAIAK 408

Query: 423 EFGKSPTLVLAHSPSRGLDVRASAEVHARLRAARDGGAAVLLISEDLDEVLQLADRVGVM 482
                P +++   P+RG+DV A  E++  +   +  G +++L+S ++ EVL ++DR+ VM
Sbjct: 409 GLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVM 468

Query: 483 TRGRIAGEF-AQPADRQAI 500
             GRI+GEF A  AD++ +
Sbjct: 469 HEGRISGEFMASEADQEKL 487



 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 14/248 (5%)

Query: 4   ALELTGIRKSFDGFAALTDAHFTARWGEVHALLGENGAGKSSLMNIAAGLYAPEAGQLLV 63
           +LE+ G+  S      + D  FT + GE+  + G  GAG++ LM +  G    E G + +
Sbjct: 258 SLEVIGLTGS-----GVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINL 312

Query: 64  DDNAVRFAGPRDAARQRIGMVHQHFK---LVRPFTVAQNILLTAPPPVGFQSHGERLREI 120
           +   V    P+D     I  + +  K   LV   +V +N+ L A   +   S G ++R  
Sbjct: 313 NGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQL---SKGVQIRHA 369

Query: 121 ERDIRNKASELGFDIDPSKR---VDALSIAEQQRVEILKVLLAGARILILDEPTAVLTDQ 177
           +  I        F+I    R   +  LS   QQ+V I K L+   ++LILDEPT  +   
Sbjct: 370 DEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVG 429

Query: 178 EAARLLQTVQGLARKGAAVVLVTHKMADVKTYADRVTVMRGGRTVATLNPADTTAAELVK 237
               + Q +     +G +++LV+ +M +V   +DR+ VM  GR       ++    +L+ 
Sbjct: 430 AKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMA 489

Query: 238 LTVGESIA 245
             VG + A
Sbjct: 490 CAVGRNPA 497