Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 739 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score =  126 bits (317), Expect = 4e-33
 Identities = 112/393 (28%), Positives = 184/393 (46%), Gaps = 42/393 (10%)

Query: 36  LPPSQPSPSGGRSKTKVKAALDAWFAERGWKPFKF--QRDVWKAIAQGRSGLLHATTGAG 93
           LPPS     G      ++  +  W    GW   +   +R +   +   +  ++ A T AG
Sbjct: 3   LPPSSSESVGFEL---LEPRIQRWIWTEGWTSLRDAQERAIPALLGADQDVIIAAATAAG 59

Query: 94  KTYAVWLGALQAFSLPRKETARPAPPPLTVLWLTPMRALAADTLRALQQPLEALGAEVHP 153
           KT A +L  L       ++T +P      VL+++P++AL  D    L +  + L   V  
Sbjct: 60  KTEAAFLPILTNLL---QDTEKPG----AVLYISPLKALINDQWDRLARLCDELELPVIA 112

Query: 154 WSTGARSGDTSSAERSAQNQRLPSVLVTTPESLSLLLARADAN--EVLGSVRLAVVDEWH 211
           W      GD S++ +    +    +L+ TPESL  L      +   +  ++R  VVDE H
Sbjct: 113 WH-----GDISASRKHRFLKSPEGILLITPESLEALFVNKGTSLAGLFANLRYLVVDELH 167

Query: 212 ELLGNKRGVQVQLALARLRRW-NPGMTVWGMSATLGNLKEA-----------MHALLGHE 259
             +G++RG Q+Q  + R+    +  +   G+SATLG++  A           +  +    
Sbjct: 168 AFIGSERGKQLQSLMHRVETIIDRPLPRVGLSATLGDMTLAAAFLRPNAPHHVSVIESKG 227

Query: 260 EGVLVQGQVPKKLVIDSLLPGRAERFPWGGHLGLT--MLPQVIEEIAASKTTLVFTNTRS 317
            G +++ Q+   +     LP + E    G  +      + + + ++      L+F N+R+
Sbjct: 228 SGQILKAQIRGYVESKKALPVQPE----GDDVFSPDHAIAEHLFQVLRGSNNLIFPNSRT 283

Query: 318 QSEIWYQALLEARPEWAG---SIALHHGSLDREVREWVELGLKSGELKAV-VCTSSLDLG 373
           Q E W+   L  R E  G       HHGSL +++RE  E  LK+G+  A  VCT++L+LG
Sbjct: 284 QVE-WFADNLRRRCEQNGVPNEFWPHHGSLAKDIREETEKALKAGDRPATAVCTTTLELG 342

Query: 374 VDFLPVERVLQIGSPKGVARLLQRAGRSGHAPG 406
           VD   ++ V+QIG+P  VA L QR GRSG  PG
Sbjct: 343 VDIGSIKTVVQIGAPPSVASLRQRLGRSGRRPG 375