Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 830 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 544/829 (65%), Positives = 651/829 (78%), Gaps = 25/829 (3%)

Query: 59  WFAERGWKPFKFQRDVWKAIAQGRSGLLHATTGAGKTYAVWLGALQAFSLPRKETA---- 114
           WF  RGWKPF FQ++VW A+  G SGLLHA+TG+GKTYAVW  AL  F+     TA    
Sbjct: 11  WFLARGWKPFAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRFAKANTLTADNKP 70

Query: 115 ---RPAPPPLTVLWLTPMRALAADTLRALQQPLEALGAEVHPWSTGARSGDTSSAERSAQ 171
              +P   PL+VLW+TPMRALAADT RAL+ PL  L     PWS G R+GDTS +ER+ Q
Sbjct: 71  RKRKPPAEPLSVLWITPMRALAADTARALEAPLAELDI---PWSVGLRTGDTSGSERARQ 127

Query: 172 NQRLPSVLVTTPESLSLLLARADANEVLGSVRLAVVDEWHELLGNKRGVQVQLALARLRR 231
           ++RLPS L+TTPESL+LLL RADA   L ++++ VVDEWHEL+GNKRGVQ+QLALARLRR
Sbjct: 128 SRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQLALARLRR 187

Query: 232 WNPGMTVWGMSATLGNLKEAMHALLGHEEGVLVQGQVPKKLVIDSLLPGRAERFPWGGHL 291
           WNP + VWG+SATLGN + A   L+G + GV VQG++ K L +D+LLP   ERFPW GH+
Sbjct: 188 WNPQLIVWGISATLGNQQHAQQVLIG-DGGVTVQGKIVKDLQVDTLLPSSIERFPWAGHM 246

Query: 292 GLTMLPQVIEEIAASKTTLVFTNTRSQSEIWYQALLEARPEWAGSIALHHGSLDREVREW 351
           GL MLPQV+ E+ +S + LVFTNTR+QSEIWYQALLEARP+WAG IALHHGSL REVR+W
Sbjct: 247 GLRMLPQVVAEVESSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAREVRDW 306

Query: 352 VELGLKSGELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRI 411
           VE  LK G LKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARL+QRAGRSGHAPGRPSR+
Sbjct: 307 VERALKEGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRPSRV 366

Query: 412 TLVPTHSIEMVEGAAARAAIAEGHIEARHSPDQPLDVLVQHLVTVALGGGFLPDDLYAEV 471
           TLVPTHS+E+VE AAA  A+    IE R SP QPLDVLVQHLV++ALGGGFLPD+L  EV
Sbjct: 367 TLVPTHSLELVEAAAAHDAVEARMIEPRESPHQPLDVLVQHLVSIALGGGFLPDELLGEV 426

Query: 472 RGTAAYENLSRESWQWCLDFVSQGGPSLSAYPDYRRAVPDAEGVWRVPDARLARRHRMNI 531
           R   AY +LS E WQW L FV  GG SL+AYPDYRRA PD +GVWRVPDARLARRHRM++
Sbjct: 427 RSAWAYHDLSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDEDGVWRVPDARLARRHRMSV 486

Query: 532 GTIVSDASMSVQF----VGGAKIGSVEESFVARMKPGDCFLFGGRLLELVRIHDMTAWVR 587
           GTIVS+A++++++     GG  +GSVEE F+AR+KPGD FLFGGRLLELVR+ +MTA+V+
Sbjct: 487 GTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVENMTAYVK 546

Query: 588 RASGKRPAVPRWNGGRMPLSNTLADAVVRQLALAGDGAYDSPELQCVRPLLEIQQQWSAL 647
           RA+GK+ AVPRWNGGRMPLS+ LADAVV +   A  G ++SPE++ ++PLLE+QQ WS L
Sbjct: 547 RATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAARGQFNSPEMRAIKPLLEVQQHWSGL 606

Query: 648 PTPHTLLAETLATREGSHLFLYPFAGRHVHLGLASLLAWRVAQHEARTFSIAVNDYGFEL 707
           P   TLLAETL +REG HLFLYPFAGRHVHLGL SLLAWR+++H   TFSIAVNDYG EL
Sbjct: 607 PRRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVNDYGLEL 666

Query: 708 LSATEVDWPALLPQVLRLPEGNGEAGGADAALLHEVLASLNAGELAQRRFREIARVSGLV 767
           LSA+E+DW   L   L           ++  LL +++ASLNAGELA RRFREIAR+SGLV
Sbjct: 667 LSASEIDWSQTLQAEL----------FSETDLLPDIIASLNAGELALRRFREIARISGLV 716

Query: 768 FQGYPGEKRSSRQLQASSSLFWEVFRKYDPDNRLLQQAEQELLAQELEIGRLRASLVRMA 827
           F GYPG  +S+RQLQASS LF+EVF++YD DN LL QAEQE+L QEL++ RL  +L ++ 
Sbjct: 717 FSGYPGAAKSNRQLQASSGLFFEVFKQYDADNMLLTQAEQEVLRQELDLQRLELTLRQIN 776

Query: 828 GQQLVLKPLARPTPFSFPLMVELFREKLSNESVADRIARMVEQLEKAAG 876
            + L L  + R TP +FPL+VE FRE LS+E +ADRIARMV  LEKAAG
Sbjct: 777 SRTLDLHAIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAAG 825