Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 86/342 (25%), Positives = 131/342 (38%), Gaps = 37/342 (10%)

Query: 81  GRSGLLHATTGAGKTYAVWLGALQAFSLPRKETARPAPPPLTVLWLTPMRALAADTLRAL 140
           GR  +  + TG+GKT A  L A+Q   +  K  ++  P    VL L P R LA      +
Sbjct: 51  GRDLMASSKTGSGKTLAFLLPAMQRV-IATKALSKRDP---RVLILLPTRELATQ----V 102

Query: 141 QQPLEALGAEVHPWSTGARSGDTSSAERSAQNQRLPSVLVTTPESLSLLLARADANEVLG 200
              L  L A     +     G+  + +  A   R P  +V TP  L+  LA+      L 
Sbjct: 103 YSQLRLLVANTQYKAIKILGGENFNDQAKAL-ARDPHFVVATPGRLADHLAQRHL--YLN 159

Query: 201 SVRLAVVDEWHELLGNKRGVQVQLALARLRRWNPGMTVWGMSATL--GNLKEAMHALLGH 258
            + L ++DE   +L    G   QL        +        SATL  G + E    LL  
Sbjct: 160 GLELLILDEADRMLD--LGFAEQLRAINQAADHKRRQTLMFSATLDHGQINEIAAELLKE 217

Query: 259 EEGVLVQGQ------VPKKLVIDSLLPGRAERFPWGGHLGLTMLPQVIEEIAASKTTLVF 312
            E V +         + +K+ +   L  + +         LT L Q    +   K  ++F
Sbjct: 218 PEHVAIGASHVENQDIAQKIYLCDNLSHKEQL--------LTRLLQ----LEPHKQVIIF 265

Query: 313 TNTRSQSEIWYQALLEARPEWAGSIALHHGSLDREVREWVELGLKSGELKAVVCTSSLDL 372
           T TR  ++     L     E   S +   G L +  R  +      G+ + +V T     
Sbjct: 266 TATRGDTD----RLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQQQILVTTDVASR 321

Query: 373 GVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRITLV 414
           G+D L V  V+    PK     + R GR+G A  +   I+LV
Sbjct: 322 GLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLV 363