Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

 Score = 82.0 bits (201), Expect = 1e-19
 Identities = 94/372 (25%), Positives = 161/372 (43%), Gaps = 29/372 (7%)

Query: 57  DAWFAERGWKPFKFQRDVWKAIAQGRSGLLHATTGAGKTYAVWLGALQAFSLPRKETARP 116
           + +  ++  K +  Q    + +  G++ LL  +T +GKT +        F+LP  ET + 
Sbjct: 51  EEYLLKKNKKLYTHQYSALENVRIGKNILLTTSTASGKTLS--------FNLPILETLQN 102

Query: 117 APPPLTVLWLTPMRALAADTLRALQQPLEALGAEVHPWSTGARSGDTSSAERSAQNQRLP 176
                T L++ P +AL  D L  L+     L   + P       GDT +++R +  ++  
Sbjct: 103 -DKDATALYIYPTKALTNDQLNNLKNLENELNITLKP---EIYDGDTPNSKRKSIREKSR 158

Query: 177 SVLVTTPESLSLLLARADANEVLGSVRLAVVDEWHELLGNKRGVQVQLALARLRRWNPGM 236
            +L    E   +L           +++  V+DE H   G   G  +   + RLRR     
Sbjct: 159 IILTNPHELHQVLQYNPKWMSFFKNLKYIVIDEAHTYRGIF-GSNISFLIRRLRRICEDY 217

Query: 237 TVWGM----SATLGNLKEAMHALLGHEEGVLVQGQVPKK---LVIDSLLPGRAERFPWGG 289
             +      SATL N KE    L+G +  V+ +   PK     V  + L        W  
Sbjct: 218 GSYPQFILASATLANAKEFSEKLVGLDFRVIDKDGSPKNKKYFVFYNTLKNEISESSWYS 277

Query: 290 HLGLTMLPQVIEEIAASKTTLVFTNTRSQSE---IWYQALLEARPEWAGSIALHHGSLDR 346
              + +L   ++       T+ FT +R  +E   IW +  L      +  I+ +      
Sbjct: 278 S-AINILELCMKY---GLQTIGFTLSRKMAELITIWTKKSL-GNNILSRKISSYRSGFTP 332

Query: 347 EVREWVELGLKSGELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPG 406
           E R  +E  LK+G+L+AV  T++L++G+D   ++ V+  G P  +  L Q+AGR+G A G
Sbjct: 333 EERRDIESRLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQAGRAGRA-G 391

Query: 407 RPSRITLVPTHS 418
             S +TL+   S
Sbjct: 392 YDSVVTLLSRES 403