Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 476 a.a., ATP-dependent RNA helicase from Caulobacter crescentus NA1000

 Score = 62.8 bits (151), Expect = 5e-14
 Identities = 97/359 (27%), Positives = 147/359 (40%), Gaps = 33/359 (9%)

Query: 46  GRSKTKVKAALDAWFAERGWK-PFKFQRDVWKAIAQGRSGLLHATTGAGKTYAVWLGALQ 104
           G +K  +KA      AE+G+K P   Q      + QG+  L  A TG GKT A  L  LQ
Sbjct: 8   GLAKPLLKA-----LAEKGYKEPTPIQAQAIPVVLQGKDLLGIAQTGTGKTAAFALPILQ 62

Query: 105 AFSLPRKETARPAPPPLTVLWLTPMRALAADTLRALQQPLEALGAEVHPWSTGARSGDTS 164
             +  RK   R        L L+P R LA       +     +G  VH    G + G   
Sbjct: 63  RLAEDRKPAPRRG---CRCLVLSPTRELATQIAENFKAYAVHMGLSVHTIYGGVKYGPQM 119

Query: 165 SAERSAQNQRLPSVLVTTPESLSLLLARADANEVLGSVRLAVVDEWHELLGNKRGVQVQL 224
            A     +     VLV TP  L   +A   A  ++    + V+DE  ++L     V ++ 
Sbjct: 120 KALAGGID-----VLVATPGRLMDHMAEKSA--IVSGTEIFVLDEADQMLDLGFVVPIRK 172

Query: 225 ALARLRRWNPGMTVWGMSATL-GNLKEAMHALLGHEEGVLVQGQVPKKLVIDS-LLPGRA 282
             A+L +    +     SAT+   + +    LL +   V V  Q      ID  +L   A
Sbjct: 173 IAAQLTKNRQNLF---FSATMPSEIGKLAGELLNNPVQVSVAPQATTVERIDQRVLFIEA 229

Query: 283 ERFPWGGHLGLTMLPQVIEEIAASKTTLVFTNTRSQSEIWYQALLEARPEWAGSIALHHG 342
           +R          +L ++  + + S+T +VFT T+  ++   + L  A  E A SI   HG
Sbjct: 230 QR-------KRPLLAELFADTSFSRT-IVFTRTKRGADRVAKYLNAAGIE-AASI---HG 277

Query: 343 SLDREVREWVELGLKSGELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRS 401
              +  RE      K+GE++A+V T     G+D   V  V+    P      + R GR+
Sbjct: 278 DKTQGQRERALAAFKAGEMRALVATDIAARGIDVNDVSHVINYELPNVPEAYVHRIGRT 336