Pairwise Alignments

Query, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

Subject, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 25/182 (13%)

Query: 235 PPS--DWIVEWKWDGIRAQLVKRAGVAWVWSRGEELVTERFPELAALGEALPDGTVLDGE 292
           PP+  DW+ E K+DG R Q+    G   + +R     T ++PE+A     LPD  ++DGE
Sbjct: 258 PPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAKYPEIADAASELPD-CIIDGE 316

Query: 293 IAVWRDGKVQPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRRVL 352
           I    D     FA LQ  +     G        +V  A+DLL   G+DLR++    R+  
Sbjct: 317 ICALDDNGAPDFAALQAALSEGKTGN-------LVYFAFDLLFDGGEDLRSMRLVERKKR 369

Query: 353 LDELVA------RMRHPSLLPSPMLEGADWTDLATQREAARTMGVEGMMLKRRDAQYGVG 406
           L++ +A      R+R+     S    G D    A  R A + + +EG++ K+ DA Y  G
Sbjct: 370 LEDFLAAGSDDPRIRYVDHFES----GGD----AVLRSACK-LSLEGIVSKQMDAPYQSG 420

Query: 407 RT 408
           RT
Sbjct: 421 RT 422