Pairwise Alignments

Query, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

Subject, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 68.6 bits (166), Expect = 7e-16
 Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 30/244 (12%)

Query: 235 PP--SDWIVEWKWDGIRAQLVKRAGVAWVWSRGEELVTERFPELAALGEALPD-GTVLDG 291
           PP  +DW+ E K DG RAQL    G   +++R     T  F  +A   E L     V+DG
Sbjct: 70  PPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFEAIATAAEDLAGHDVVMDG 129

Query: 292 EIAVWRDGKVQPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRRV 351
           E+ V+    +  F  L++ + +++          +   A+DLL  +G DLR +P   R+ 
Sbjct: 130 EVTVFGKTGLPDFQALRRELAKRS-------SPNLTFQAFDLLHLDGYDLRRVPLIERKR 182

Query: 352 LLDELVARMRHPSLLPSPMLEGADWTDLATQREAAR---TMGVEGMMLKRRDAQYGVGRT 408
           +L EL+          +  +   D+ +L       R    MG+EG++ KR+DA Y  GR 
Sbjct: 183 VLRELIGD-------AAGTIAYVDYLELEEGEPVYRHACKMGLEGIVSKRKDAPYRSGRQ 235

Query: 409 KDVGVWWKWKIDPLSIDAVLIYAQRGHGRRASLFSDYTFAVWDSPPGQEDRKLVPFAKAY 468
           +   +W K K        ++ + ++   +   + S Y    W      E  +LV   KA 
Sbjct: 236 E---IWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLY-LGRW------EGDRLVYAGKAQ 285

Query: 469 SGLT 472
           +G T
Sbjct: 286 TGYT 289