Pairwise Alignments

Query, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

Subject, 364 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 70/198 (35%), Positives = 93/198 (46%), Gaps = 16/198 (8%)

Query: 235 PPS--DWIVEWKWDGIRAQLVKRAGVAWVWSRGEELVTERFPELAALGEALPDGT-VLDG 291
           PP   DW  E KWDG R  +    G   + +RG    TERFP +      L   T +LDG
Sbjct: 33  PPKGPDWAFEVKWDGYRIAVHIEPGRVRILTRGGYDWTERFPTIVDDARRLAVKTAILDG 92

Query: 292 EIAVWRDGKVQPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRRV 351
           E  V  D     F  LQ+ +GR     +      +V  A+DLL  +G DLR LP   RR 
Sbjct: 93  EAVVLDDKGRSDFGMLQRALGRLPSAVEAGA---IVFYAFDLLYLDGHDLRRLPLRERRR 149

Query: 352 LLDELVARMRHPSLLPSPMLEGADWTDLATQREAARTMGVEGMMLKRRDAQYGVGRTKDV 411
           LL+ LVA  R  ++  S  L+ AD  +       A   G+EG++ K  +  Y  GR    
Sbjct: 150 LLEPLVA-AREGAVRLSEELQ-ADGDEFF---RVACAHGLEGIIAKHIEKPYRSGR---- 200

Query: 412 GVWWKWKIDPLSIDAVLI 429
           G WW+ KI   S D+ +I
Sbjct: 201 GEWWQ-KITCKSRDSFVI 217