Pairwise Alignments

Query, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

Subject, 818 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 59.7 bits (143), Expect = 4e-13
 Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 21/188 (11%)

Query: 236 PSDWIVEWKWDGIRAQLVKRAGVAWVWSRGEELVTERFPELAALGEALP-DGTVLDGEIA 294
           P  W+ E K+DG R       G   + +RG    T+R+ +L  +   LP    ++DGEI 
Sbjct: 237 PERWLHEIKFDGYRTMAHVADGKVRLVTRGGLDWTKRYGDLPEVFRRLPCRDVIIDGEIV 296

Query: 295 VWRDGKVQPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRRVLLD 354
           V  +  V  FA LQ  +      +       +V  A+DLL   G +L  +P  +R+ LL 
Sbjct: 297 VLDETGVSRFALLQDALSTGAGNS-------LVFYAFDLLHLNGWNLFDVPLEKRKALLK 349

Query: 355 ELVARM---RHPSLLPSPML-EGADWTDLATQREAARTMGVEGMMLKRRDAQYGVGRTKD 410
           +L+A     R        +L EG    D A++      MG+EG++ KR  A Y  GR+K 
Sbjct: 350 QLLAGQVSSRSAIQFSDHVLGEGRALYDRASE------MGLEGIVSKRISAPYRSGRSK- 402

Query: 411 VGVWWKWK 418
              W K K
Sbjct: 403 --TWTKTK 408