Pairwise Alignments

Query, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

Subject, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 93/358 (25%), Positives = 146/358 (40%), Gaps = 50/358 (13%)

Query: 198 APESGMEQVQKTSGQPYPFFLAHPFNLPLDQFDAVLGPPSD-WIVEWKWDGIRAQLVKRA 256
           AP S     +K  G P P   A     P++   A   P  D W  E KWDG R    K  
Sbjct: 14  APSSA---AKKAGGFPLPVSTA-----PMEARSATELPGGDAWQYEPKWDGFRCLAFKSG 65

Query: 257 GVAWVWSRGEELVTERFPELAALGEAL-PDGTVLDGEIAVWRDGKVQPFAELQKRI-GRK 314
               + ++  + +   FPE+ AL   L PD  VLDGE+ +  DG++  F  LQ R+    
Sbjct: 66  DEVDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGELVIEVDGRLS-FDALQMRLHPAA 124

Query: 315 TLGAKLLRDIPVVLLAYDLLE-WEGQDLRALPQSRRRVLLD-----ELVARMRHPSLLPS 368
           +   KL ++ P  L+ +D+L   +G  L   P   RR  L+       VA M   S    
Sbjct: 125 SRVQKLSQETPAKLILFDMLAGTDGTILTGEPLQTRRACLEAFAKKNAVAEMLESSPFTL 184

Query: 369 PMLEGADWTDLATQREAARTMGVEGMMLKRRDAQYGVGRTKDVGV-----------WWKW 417
            + E   W    T  EA  T   +G++ KRRD  Y  G    V V            +++
Sbjct: 185 DIKEAERW---LTSWEAGAT---DGVVAKRRDGVYECGERAMVKVKRLKTADCVVGGFRY 238

Query: 418 KIDPLSIDAVLIYAQRGHGRRASLFSDYTFAVWDSPPGQEDRKLVPFAKAYSGLTDAEMA 477
           + D   + ++L+      G    +    T +  + P      + +     ++G      +
Sbjct: 239 ESDSSLVGSLLLGLYDTEGLLNHVGFTATISDKERPALTNQLEALREPPGFTGKAPGGPS 298

Query: 478 RVDAIIRKTTVESFGPVKSVKPTLVFELGFEGIA-RSTRHKSGIAVRFPRMLRWREDK 534
           R  +       E  G  + V+P LV E+ F+ ++ R  RH +       +++RWR DK
Sbjct: 299 RWSS-------ERSGEWEPVRPELVVEVRFDHVSNRRFRHGT-------KLMRWRPDK 342