Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 307 a.a., Inositol transport system sugar-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 21/319 (6%)

Query: 6   RRLALTAVAAAAFASLPALAAEKVNLGVSIPAATHSFMGGINYWANQAKKDLEKEHKDLK 65
           ++  LT +  A FA L   A   + +GVSI      F+  +  +     KDL   +   +
Sbjct: 2   KKRLLTYLFVALFAPL---ALADIRIGVSIAQVDDVFLAQMRDYMAAHAKDLPGVNLQFE 58

Query: 66  ITIKTAANAPEQANQLQDLSTVTKINALVVFPFESAALTKPVAQVKAKGAYVTVVDRGLT 125
                  +   Q NQ+Q+  T   ++A++V P ++AA  K  A  +     +  V+R   
Sbjct: 59  ---DAQGDVVRQLNQVQNF-TAQGMDAIIVNPVDTAATQKMTAHAQKASVPLVYVNRRPD 114

Query: 126 DTSAQDA--YVAGDNTAFGKIPAEYIVKQLNGKGNVVALRGI-ATTLDNERMDAFNAVLK 182
                    YV  D    G++   Y+ +++ GKGN+  + G+ +    + R      VLK
Sbjct: 115 QAELPPGVGYVGSDEIKAGEMQMRYLAEKMGGKGNLAIMLGLLSNNATHNRTQGVKEVLK 174

Query: 183 GSPDIKLLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVLKAISQAKRDDI 242
             PDI +++ + A W R  A  +  +++   K IDA+ A  D+MA+G   AI+QA     
Sbjct: 175 SYPDIHVVEEQSAEWQRSKAMDLMNNWILSGKKIDAVAANADEMAIGAAMAINQAGMRSG 234

Query: 243 KIVF-----GGAGAKDMVKTIMDGKDPRITADVSYSPKFIYDAIKLTAEARLKGEKLPAT 297
           K +      GG    D +K     KD  +      +      +I L A   ++ E   A 
Sbjct: 235 KDILVGGSDGGPAGLDAIK-----KDQLLVTVYQDNKGQAIGSIDL-ALKMIRKEPFAAE 288

Query: 298 TIIPSVLITKENAKEFYHP 316
             IP  LITK N ++F +P
Sbjct: 289 LTIPYQLITKANYQDFLNP 307