Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 327 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 22/321 (6%)

Query: 1   MTTFTRRLALTAVAAAAFASLPALAA-EKVNLGVSIPAATHSFMGGINYWANQAKKDLEK 59
           M   T   A+      AFA LP LA  E   +G    A T S     N W       ++ 
Sbjct: 10  MLAATAAGAIAIAGTVAFAELPKLAQKETYKVGF---AQTESN----NPWRIAQTNSMKA 62

Query: 60  EHKDLKITIKTAANAPEQANQLQDLSTVTKINALVVF--PFESAALTKPVAQVKAKGAYV 117
           E + L   +     A   A Q+ D++++      ++F  P E   L   V   K  G  V
Sbjct: 63  EAEKLGHQLVYTDAAGSAAKQVADVNSMIAQGVDLIFLAPREEKPLIPAVMAAKKAGIPV 122

Query: 118 TVVDRGLTDTSAQDA-----YVAGDNTAFGKIPAEYIVKQLNGKGNVVALRG-IATTLDN 171
            ++DR +  + A+       ++  D    GK  AE++VK  NGK  ++ L G   ++  N
Sbjct: 123 ILLDRSVDPSLAKAGEDYVTFIGSDFIEEGKRIAEWLVKNANGKSKIIELEGTTGSSPAN 182

Query: 172 ERMDAFNAVLKGSPDIKLLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVL 231
           +R   F+  +K +   +++ ++  ++ RD   +V +  L    + D ++A +D+MA+G +
Sbjct: 183 DRKKGFDETIKAAGGFEIVASQSGDFARDKGRQVAEALLQAHPDADIVYAHNDEMAIGAI 242

Query: 232 KAISQAKRDDIK--IVFGGAGAKDMVKTIMDGKDPRITADVSYSPKFIYDAIKLTAEARL 289
            AI  A +   K  +V    G K+ V+ ++DGK   I A V  +P+F   A + T     
Sbjct: 243 AAIEAAGKVPGKDVLVLSIDGGKEAVQAVIDGK---IAAVVECNPRFGPKAFE-TMLRYA 298

Query: 290 KGEKLPATTIIPSVLITKENA 310
           KGEK+    I         NA
Sbjct: 299 KGEKIDPMVINEDKFYDSSNA 319