Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 316 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  258 bits (658), Expect = 2e-73
 Identities = 139/315 (44%), Positives = 192/315 (60%), Gaps = 6/315 (1%)

Query: 8   LALTAVAAAAFASLPALAAEKVNLGVSIPAATHSFMGGINYWANQAKKDLEKEHKDLKIT 67
           +   AVA  A  S      + V +GVSIPAA H +  G+ + A +  K L ++H  L + 
Sbjct: 6   MGFAAVAMMALTSAAHAQDKNVTIGVSIPAADHGWTAGVVFHAERVAKLLMEQHPGLNVI 65

Query: 68  IKTAANAPEQANQLQDLSTVTKINALVVFPFESAALTKPVAQVKAKGAYVTVVDRG--LT 125
           +KT+ +   QAN +QDL T   I+ALV+ P +   L   + +VK KG +V +VDR     
Sbjct: 66  VKTSPDPASQANAVQDLET-QGIDALVILPTDPDPLVNAIKEVKGKGTFVALVDRAPSTN 124

Query: 126 DTSAQDAYVAGDNTAFGKIPAEYIVKQLNGKGNVVALRGIATTLDNERMDAFNAVLKGSP 185
           D S +D YVAG+N A G++  EYI K    +  VV +RG+   +D +R D F+  + GS 
Sbjct: 125 DNSVRDLYVAGNNPALGQVAGEYI-KATTPEAKVVVIRGLPIPIDQQRQDGFDKGIAGSK 183

Query: 186 DIKLLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVLKAISQAKRDDIKIV 245
            +++LD +Y NWNRDDAFKV QDYLT++  ID +W  DDDMAVGVL+AI QAKR DI+ V
Sbjct: 184 -VEILDRQYGNWNRDDAFKVMQDYLTKYPQIDVVWCQDDDMAVGVLQAIDQAKRTDIQYV 242

Query: 246 FGGAGAKDMVKTIMDGKDPRITADVSYSPKFIYDAIKLTAEARLKGEKLPATTIIPSVLI 305
             GAG+KDM+K +MDG D  I  DV Y P  +  A+++T         +  T  I + L+
Sbjct: 243 VAGAGSKDMIKKVMDG-DKMIPVDVLYPPAMVGTALEMTVANFYGQVPVRGTYTIDATLV 301

Query: 306 TKENAKEFYHPNSPF 320
           TKENAK+FY P+SPF
Sbjct: 302 TKENAKDFYFPDSPF 316