Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 309 a.a., rhizopine uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 80.1 bits (196), Expect = 6e-20
 Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 20/311 (6%)

Query: 17  AFASLPALAAEKVNLGVSIPAATHSFMGGINYWANQAKKDLEKEHKDLKITIKTAAN-AP 75
           A A L + AA    +GVS+     +F+  +     +  K L+     +++ ++ A N   
Sbjct: 9   AMAVLMSTAAHAETIGVSMALFDDNFLTVLRSGMQEYAKTLD----GVELQVEDAQNDVA 64

Query: 76  EQANQLQDLSTVTKINALVVFPFES---AALTKPVAQVKAKGAYVTVVDRGLTDTSAQDA 132
           +Q +Q+Q+      ++A++V P ++   AA++K  A       YV      +     + A
Sbjct: 65  KQQSQIQNF-IAAGVDAIIVNPVDTDATAAMSKIAADAGIPLVYVNREPVNVDTLPDKQA 123

Query: 133 YVAGDNTAFGKIPAEYIVKQLNGKGNVVALRG-IATTLDNERMDAFNAVLKGS--PDIKL 189
           +VA +    G +  + I K L GKG  V + G ++      R    + V+       I++
Sbjct: 124 FVASNEQESGTLQTKEICKMLGGKGKAVVMMGELSNQAARMRTKDIHDVIATDECKGIEI 183

Query: 190 LDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVLKAISQAKRDDIKIVFGGA 249
           ++ + ANW+R     +  ++L+     DA+ + +D+MA+G ++A+  A R    +V GG 
Sbjct: 184 VEEQTANWSRTQGSDLMTNWLSAGLEFDAVISNNDEMAIGAIQALKAAGRSMDSVVIGGI 243

Query: 250 GAKDMVKTIMDGKDPRITA--DVSYSPKFIYD-AIKLTAEARLKGEKLPATTIIPSVLIT 306
            A       M   D  +T   + +   K   D A+KL      KGE +     IP  L+T
Sbjct: 244 DATQDALAAMAAGDLDVTVFQNAAGQGKGSVDAALKLA-----KGEPVEKKVYIPFELVT 298

Query: 307 KENAKEFYHPN 317
           K+N  ++   N
Sbjct: 299 KDNLAQYQTKN 309