Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  106 bits (265), Expect = 7e-28
 Identities = 101/328 (30%), Positives = 158/328 (48%), Gaps = 37/328 (11%)

Query: 9   ALTAVAAAAFASLPALAA----EKVNLGVSIPAATHSFMGGINYWANQAKKDLEKE---H 61
           A+ AV AA  A +PA  A    +K  +G S  A T      I  W  Q  KD+  E   H
Sbjct: 11  AVAAVLAATTALMPADDALAQDKKFRIGFS-QATT------IEPWRAQFNKDIIAEAAKH 63

Query: 62  KDLKITIKTAANAPEQANQLQDLSTVTK--INALVVFPFESAALTKPVAQVKAKGAYVTV 119
            D+++ I    +  E+  Q+ D+  + +  ++AL+V P ESA LT  V Q       V V
Sbjct: 64  PDVELIITDGEDRTEK--QVADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFV 121

Query: 120 VDRGLTDTSAQDAYVAGDNTAFGKIPAEYIVKQLNGKG----NVVAL-RGIATTLDNERM 174
           +DR + +T     +V GDN   G+   EY V+ L GKG    N+V +  G+ T   ++R 
Sbjct: 122 LDRNV-ETDQYTQFVGGDNKLIGRAAGEYAVELLGGKGKAEGNIVEIWGGMGTQPAHDRH 180

Query: 175 DAFNAVLKGSPDIK-LLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDMAVGVLKA 233
           D F+      P IK LLD +  +W +D A+ +    L   + ID ++  +D MA G   A
Sbjct: 181 DGFHEFTDKEPGIKNLLDQQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLA 240

Query: 234 ISQAKRD-DIKIVFGGAGAKDMVKTIMDGKDPRITADVSYS---PKFIYDAIKLTAEARL 289
              A R+ ++K +   A   + V  + +G+   +TA   Y+    + +  A+K      L
Sbjct: 241 AKDAGREKEMKFIGIDALPNEGVTWVNNGE---LTATFLYATPGAEGLRQAVKF-----L 292

Query: 290 KGEKLPATTIIPSVLITKENAKEFYHPN 317
           KGEK+  T  + ++ +TKENA +    N
Sbjct: 293 KGEKVEKTVTLDTMKVTKENAAQILKDN 320