Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 340 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 80.1 bits (196), Expect = 7e-20
 Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 12/248 (4%)

Query: 50  ANQAKKDLEKEHKDLKITIKTA-ANAPEQANQLQDLSTVTKINALVVFPFESAALTKPVA 108
           A  A  + +++  D+++++++A  + P Q   +++      +NA++V P    A     A
Sbjct: 47  AKAAAAEWKEKGVDVEVSVQSANVDVPGQIAHIRNF-IAEGVNAIIVNPNSPTAFDPIFA 105

Query: 109 QVKAKGAYVTVVDRGLTDTSAQDA-YVAGDNTAFGKIPAEYIVKQLNGKGNVVALRGIAT 167
           Q K  G  V   D    + S+ DA YV  D TA+G   A+++ + L GKG VVA+ G+A 
Sbjct: 106 QAKEAGILVIATD---AEVSSPDAIYVGIDQTAWGAAGAKWLAETLGGKGKVVAINGVAG 162

Query: 168 TLDNE-RMDAFNAVLKGSPDIKLLDAKYANWNRDDAFKVTQDYLTRFKNIDAIWAADDDM 226
              NE R+  + +V K   DI++++   ANW++    +  Q+ L  + +I+ +    D M
Sbjct: 163 HPANEMRVAGYKSVFKDHADIQVVNEVNANWDQAQGQQAMQNILATYPDINGV-LVQDGM 221

Query: 227 AVGVLKAISQAKRDDIKIVFGGAGAKDMVKTIMDGKDPRITADVSYSPKFIYDAIKLTAE 286
           A G  K+I  A +   +I   G   KD +   +  K   + +  + +P  +  +    A 
Sbjct: 222 AAGAWKSIMDAGKAG-QIAATGEIRKDFIDLWIKEK---LNSGATVNPPGVMASALNVAV 277

Query: 287 ARLKGEKL 294
             L+G++L
Sbjct: 278 LMLQGKEL 285