Pairwise Alignments

Query, 515 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 502 a.a., galactose/methyl galactoside import ATP-binding protein MglA from Vibrio cholerae E7946 ATCC 55056

 Score =  322 bits (826), Expect = 2e-92
 Identities = 179/499 (35%), Positives = 296/499 (59%), Gaps = 17/499 (3%)

Query: 15  VEFDGVVKAFGPVQVLHGVSFALAPGRVYGLLGENGAGKSTLMKILAGYEQLTGGTLRIN 74
           +E  GV K F  V+ L  V+  + P  V+ L+GENGAGKSTL+K L G  +   G +   
Sbjct: 10  LEMTGVSKEFPGVKALDKVNLKVRPHSVHALMGENGAGKSTLLKCLFGIYEKDEGDIIFL 69

Query: 75  GQPQQFGSSRDAEALGIVLIHQEFNLAEDLSVAQNIFLGHEKKKGWLLDDAAMEREAAAA 134
           GQ   F SS++A   G+ ++HQE N  +  SV  NI+LG    KG+ +D   M R+  A 
Sbjct: 70  GQHVNFSSSKEALESGVSMVHQELNQVKQCSVMDNIWLGRYPTKGFFVDHDKMYRDTKAI 129

Query: 135 LSAVGLNIDPRTKVRKLIVAEKQLVEIAKAIARRARLLVMDEPTATLTPGETERLFKLIA 194
            + + ++IDP+ KV  L V++ Q++EIAKA +  A++++MDEPT++LT  E   LF +I 
Sbjct: 130 FAELDIDIDPKVKVATLSVSQMQMLEIAKAFSYDAKVVIMDEPTSSLTEKEVNHLFTIIK 189

Query: 195 QLRADGVTIVYISHKLDEVEQVTDEVIVMRDGRFVARAPTPEVTRQQMANLMVGRELADL 254
           +L+  G  +VYISHK++E+  + DE+ ++RDG++V   P   +   ++ ++MVGREL   
Sbjct: 190 KLKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRPLKGLDMDKIISMMVGRELTQR 249

Query: 255 YP-----PRDVVVAADAPAMRVRDFNVPGWAQDASFEVRPGEILGFAGLVGAGRTELFEG 309
           +P     P++V++        +   N P   QD SFE+R GEILG AGLVG+ RT++ E 
Sbjct: 250 FPEKSNEPKNVIL----EVKNLTALNQPS-IQDISFELRAGEILGVAGLVGSRRTDIVET 304

Query: 310 LLGLRPAS-GNVEMLGKPVPGGKGWRNPRDAAKHGLTYLSEDRKGKGLHVNFGLRQNLTL 368
           + G+R  S G++ + G+ +       +  +A ++G   ++E+R+  G++ N  +  N  +
Sbjct: 305 IFGVRERSAGHILLHGREMKN----HDAHEAIRNGFALVTEERRSTGIYSNLDITFNSLV 360

Query: 369 MALERYAQPW--LRPEAERGALAGAVKEYGIRTGSLEVKASSLSGGNQQKLALAKVLQPR 426
             ++ Y  P+  L  +  +      +    ++T S +    SLSGGNQQK+ + + L  +
Sbjct: 361 ANVDEYKTPYGLLSDKKMKSDTQWVIDSMRVKTPSHQTHIGSLSGGNQQKVIIGRWLLTQ 420

Query: 427 PKVVVLDEPTRGVDVGAKRDIYFLIQRLAREGLAVIVVSSELMELIGLCHRVAVMRAGRL 486
           P++++LDEPTRG+DVGAK +IY LI  LA++   +I++SSE+ EL+G+  R+ VM  GR 
Sbjct: 421 PEILMLDEPTRGIDVGAKYEIYQLILELAKKDKGIIIISSEMPELLGITDRIMVMSNGRN 480

Query: 487 VATLDADHLTEEELIAHAT 505
              ++    ++ E++  A+
Sbjct: 481 AGIVNTKQTSQNEILELAS 499



 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 28/233 (12%)

Query: 284 SFEVRPGEILGFAGLVGAGRTELFEGLLGL-RPASGNVEMLGKPVPGGKGWRNPRDAAKH 342
           + +VRP  +    G  GAG++ L + L G+     G++  LG+ V     + + ++A + 
Sbjct: 29  NLKVRPHSVHALMGENGAGKSTLLKCLFGIYEKDEGDIIFLGQHV----NFSSSKEALES 84

Query: 343 GLTYLSEDRKGKGLHVNFGLRQNLTLMALERYAQPWLRPEAERGALAGAVKEYGIRTGSL 402
           G++ + ++           L Q      ++     WL     +G      K Y       
Sbjct: 85  GVSMVHQE-----------LNQVKQCSVMDNI---WLGRYPTKGFFVDHDKMYRDTKAIF 130

Query: 403 ---------EVKASSLSGGNQQKLALAKVLQPRPKVVVLDEPTRGVDVGAKRDIYFLIQR 453
                    +VK ++LS    Q L +AK      KVV++DEPT  +       ++ +I++
Sbjct: 131 AELDIDIDPKVKVATLSVSQMQMLEIAKAFSYDAKVVIMDEPTSSLTEKEVNHLFTIIKK 190

Query: 454 LAREGLAVIVVSSELMELIGLCHRVAVMRAGRLVATLDADHLTEEELIAHATG 506
           L  +G  V+ +S ++ E+  +C  + ++R G+ V T     L  +++I+   G
Sbjct: 191 LKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRPLKGLDMDKIISMMVG 243